Evidence map›Paper›PMID 40452229›Full record

ArticleClinical and molecular hepatology2025

Genome-wide interaction study with body mass index identifies CYP7A1 and GIPR as genetic modulators of metabolic dysfunction-associated steatotic liver disease.

Oveis Jamialahmadi, Endrina Mujica, Lowri Morris, Rosellina Margherita Mancina, Ester Ciociola, Sami F Qadri, Samantha Maurotti, Francesco Malvestiti, Ruifang Li-Gao, Luisa Ronzoni and 11 more

Abstract read
In one paragraph

Article in Clinical and molecular hepatology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

21 authors.

Oveis JamialahmadiDepartment of Molecular and Clinical Medicine, University of Gothenburg, Gothenburg, Sweden.
Endrina MujicaThe Beijer Laboratory and Department of Immunology, Genetics and Pathology, Uppsala University and SciLifeLab, Uppsala, Sweden.
Lowri MorrisSection of Genetics and Genomics, Department of Metabolism, Digestion, and Reproduction, Faculty of Medicine, Imperial College London, London, UK.
Rosellina Margherita MancinaDepartment of Molecular and Clinical Medicine, University of Gothenburg, Gothenburg, Sweden.
Ester CiociolaDepartment of Molecular and Clinical Medicine, University of Gothenburg, Gothenburg, Sweden.
Sami F QadriDepartment of Medicine, University of Helsinki and Helsinki University Hospital, Helsinki, Finland.
Samantha MaurottiDepartment of Experimental and Clinical Medicine, Magna Graecia University, Catanzaro, Italy.
Francesco MalvestitiDepartment of Pathophysiology and Transplantation, Università degli Studi di Milano, Milan, Italy.
Ruifang Li-GaoDepartment of Clinical Epidemiology, Leiden University Medical Center, Leiden, Netherlands.
Luisa RonzoniPrecision Medicine - Biological Resource Center and Department of Transfusion Medicine, Fondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico, Milan, Italy.
Federica TavaglioneMASLD Research Center, Division of Gastroenterology and Hepatology, University of California at San Diego, La Jolla, CA, USA.
Hannah MaudeSection of Genetics and Genomics, Department of Metabolism, Digestion, and Reproduction, Faculty of Medicine, Imperial College London, London, UK.
Amin AllalouDivision of Visual Information and Interaction, Department of Information Technology, Uppsala University, Uppsala, Sweden.
Anastasia EmmanouilidouThe Beijer Laboratory and Department of Immunology, Genetics and Pathology, Uppsala University and SciLifeLab, Uppsala, Sweden.
Umberto Vespasiani-GentilucciDepartment of Medicine and Surgery, Università Campus Bio-Medico di Roma, Rome, Italy.
Frits Richard RosendaalDepartment of Clinical Epidemiology, Leiden University Medical Center, Leiden, Netherlands.
Hannele Yki-JärvinenDepartment of Medicine, University of Helsinki and Helsinki University Hospital, Helsinki, Finland.
Inês CebolaSection of Genetics and Genomics, Department of Metabolism, Digestion, and Reproduction, Faculty of Medicine, Imperial College London, London, UK.
Luca ValentiDepartment of Pathophysiology and Transplantation, Università degli Studi di Milano, Milan, Italy.
Marcel den HoedThe Beijer Laboratory and Department of Immunology, Genetics and Pathology, Uppsala University and SciLifeLab, Uppsala, Sweden.
Stefano RomeoDepartment of Molecular and Clinical Medicine, University of Gothenburg, Gothenburg, Sweden.

Funding

Academy of Finland 309263Biomedicum Helsinki Foundation 20230241European Union 101016726European Union 101096312European Union H2020-ICT-2018-20/H2020-ICT-2020-2Finnish Medical Foundation 5843Italian Ministry of Health PNRR-MAD-2022-12375656Italian Ministry of Health RF-2016-02364358Italian ministry of ResearchJPI HDHL-DIYUFOODKnut and Alice Wallenberg Foundation KAW 2017.0203Maud Kuistila Memorial Foundation 20210301BNC3Rs PhD studentship NC/Y500628/1NIH/NIDDK-funded Accelerating Medicines Partnership for Common Metabolic Disorders 5UM1DK105554-5000826-5500002718NIH/NIDDK-funded Accelerating Medicines Partnership for Type 2 DiabetesNovonordisk Distinguished Investigator Grant NNF23OC0082114Novo Nordisk Foundation NNF19OC0057503Novonordisk Project grants in Endocrinology and Metabolism NNF20OC0063883Orion Research FoundationRicerca Corrente Fondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico, Fondazione IRCCS Ca' Granda PR-0391Sigrid Jusélius FoundationSwedish CancerfondenSwedish Heart Lung Foundation 20220334Swedish Heart Lung Foundation 20230518Swedish Research Council 2023-02079Swedish Research Council 2023-02556Swedish state ALFGBG-965360Wellcome TrustWellcome Trust 210182Wellcome Trust and the Royal Society 224662/Z/21/ZYrjö Jahnsson Foundation 20207313
6 · The paper itself

Abstract

BACKGROUND/

aimsMetabolic dysfunction-associated steatotic liver disease (MASLD) may progress to liver inflammation, fibrosis, cirrhosis and hepatocellular carcinoma. So far, genome-wide association studies explain a small fraction of MASLD heritability.

methodsWe sought to identify novel genetic determinants of MASLD by exploring interactions between genetic variants and body mass index (BMI). First, we examined genome-wide interactions with BMI for circulating alanine aminotransferase (ALT) levels using UK Biobank data. For identified loci, we next examined associations with hepatic proton density fat fraction (PDFF) in 35,146 independent UK Biobank participants. Associations with PDFF were replicated in four independent European cohorts, followed by a phenome-wide association study. Finally, we used human liver epigenomic maps and CRISPR/Cas9 experiments in vitro and in vivo to functionally characterize the CYP7A1 locus.

resultsThirteen loci interact with BMI for ALT (P<5E-8), including eight well-known genetic modulators of MASLD. Two loci-UBXN2B/CYP7A1 and GIPR-are additionally associated with PDFF. For the intronic rs34783010 in GIPR, the minor T allele is associated with lower BMI and higher HbA1c and liver triglyceride content in humans. The UBXN2B/CYP7A1 locus is associated with PDFF in four additional European cohorts. Epigenomic data and in vitro experiments in human liver cells prioritise rs10504255 and CYP7A1 as the functional effectors in this locus. Perturbation of CYP7A1 orthologues using CRISPR/Cas9 results in less liver fat in 10-day-old, metabolically challenged zebrafish larvae.

conclusionA genome-wide single nucleotide polymorphism×BMI design fuelled identification of two MASLD genes: CYP7A1 and GIPR.

Indexed as

Body Mass IndexCholesterol 7-alpha-HydroxylaseFatty LiverGenome-Wide Association StudyAdaptor Proteins, Signal TransducingAgedAlanine TransaminaseAnimalsFemaleHumansLiverMaleMiddle AgedPolymorphism, Single NucleotideZebrafishAdaptor Proteins, Signal TransducingAlanine TransaminaseCholesterol 7-alpha-HydroxylaseCYP7A1 protein, humanGCKR protein, humanCYP7A1Gastric inhibitory polypeptide receptorGene-environment interactionGenome-wide association studyMASLD

Identifiers

PMID40452229
PMCPMC12538139

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.