Evidence map›Paper›PMID 40450012›Full record

ArticleNature communications2025

Allosteric amyloid catalysis by coiled coil fibrils.

Sisira Mambram Kunnath, Elad Arad, Ran Zalk, Itamar Kass, Anat Shahar, Albert Batushansky, Hanna Rapaport, Raz Jelinek

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Helical reconstruction of amyloids in cryoSPARC.Acta crystallographica. Section F, Structural biology communications · 2026
    Article
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Sisira Mambram Kunnath *Ilse Katz Institute (IKI) for Nanoscale Science and Technology, Ben-Gurion University of the Negev, Beer Sheva, Israel.
Elad Arad *Ilse Katz Institute (IKI) for Nanoscale Science and Technology, Ben-Gurion University of the Negev, Beer Sheva, Israel.ORCID http://orcid.org/0000-0002-0802-0079
Ran ZalkIlse Katz Institute (IKI) for Nanoscale Science and Technology, Ben-Gurion University of the Negev, Beer Sheva, Israel.
Itamar KassIlse Katz Institute (IKI) for Nanoscale Science and Technology, Ben-Gurion University of the Negev, Beer Sheva, Israel.ORCID http://orcid.org/0000-0002-5368-937X
Anat ShaharIlse Katz Institute (IKI) for Nanoscale Science and Technology, Ben-Gurion University of the Negev, Beer Sheva, Israel.
Albert BatushanskyIlse Katz Institute (IKI) for Nanoscale Science and Technology, Ben-Gurion University of the Negev, Beer Sheva, Israel.
Hanna RapaportIlse Katz Institute (IKI) for Nanoscale Science and Technology, Ben-Gurion University of the Negev, Beer Sheva, Israel.
Raz JelinekIlse Katz Institute (IKI) for Nanoscale Science and Technology, Ben-Gurion University of the Negev, Beer Sheva, Israel. Razj@bgu.ac.il.ORCID http://orcid.org/0000-0002-0336-1384

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Amyloid-mediated catalysis of key biological reactions has recently attracted significant interest as this phenomenon may portend new functions for physiological and synthetic amyloid proteins. Here, we report an allosteric mechanism of catalytic amyloids, mediated via an unconventional coiled-coil fibril organization, facilitating hydrolysis of β-lactam antibiotics. Specifically, the hydrolysis reaction was catalyzed by a fibrillar peptide comprising alternating lysine/phenylalanine β-sheet-forming sequence. Analysis of peptide variants, simulations, and cryogenic electron microscopy reveal that the β-lactam molecules attach electrostatically to the lysine sidechains on the fibrils' surfaces, generating a double-coiled fibril structure in which the anchored β-lactam molecules are nestled within twisted fibril strands. This organization facilitates the allosteric catalytic process in which hydrolytic β-lactam ring opening is induced via nucleophilic attacks by the lysine sidechains degradation. The allosteric catalytic activity of the phenylalanine/lysine amyloid fibrils highlights the functional versatility of amyloid fibrils and their potential applications in human health and environmental biotechnology.

Indexed as

AmyloidAllosteric RegulationCatalysisCryoelectron MicroscopyHumansHydrolysisLysinePeptidesPhenylalanineAmyloidLysinePeptidesPhenylalanine

Identifiers

PMID40450012
PMCPMC12126523

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.