Evidence map›Paper›PMID 40447791›Full record

ArticleScientific reports2025

On the accurate computation of expected modularity in probabilistic networks.

Xin Shen, Matteo Magnani, Christian Rohner, Fiona Skerman

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Xin ShenInfoLab, Department of Information Technology, Uppsala University, 75105, Uppsala, Sweden. xin.shen@it.uu.se.
Matteo MagnaniInfoLab, Department of Information Technology, Uppsala University, 75105, Uppsala, Sweden.
Christian RohnerInfoLab, Department of Information Technology, Uppsala University, 75105, Uppsala, Sweden.
Fiona SkermanDepartment of Mathematics, Uppsala University, 75105, Uppsala, Sweden.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Modularity is one of the most widely used measures for evaluating communities in networks. In probabilistic networks, where the existence of edges is uncertain and uncertainty is represented by probabilities, the expected value of modularity can be used instead. However, efficiently computing expected modularity is challenging. To address this challenge, we propose a novel and efficient technique ([Formula: see text]) for computing the probability distribution of modularity and its expected value. In this paper, we implement and compare our method and various general approaches for expected modularity computation in probabilistic networks. These include: (1) translating probabilistic networks into deterministic ones by removing low-probability edges or treating probabilities as weights, (2) using Monte Carlo sampling to approximate expected modularity, and (3) brute-force computation. We evaluate the accuracy and time efficiency of [Formula: see text] through comprehensive experiments on both real-world and synthetic networks with diverse characteristics. Our results demonstrate that removing low-probability edges or treating probabilities as weights produces inaccurate results, while the convergence of the sampling method varies with the parameters of the network. Brute-force computation, though accurate, is prohibitively slow. In contrast, our method is much faster than brute-force computation, but guarantees an accurate result.

Indexed as

AlgorithmsModularity calculationProbabilistic networks

Identifiers

PMID40447791
PMCPMC12125379

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.