Evidence map›Paper›PMID 40443945›Full record

ArticleJournal of biomedical optics2025

Toward fluorescence digital twins: multi-parameter experimental validation of fluorescence Monte Carlo simulations using solid phantoms.

Mayna H Nguyen, Ethan P M LaRochelle, Edwin A Robledo, Alberto J Ruiz

Abstract read
In one paragraph

Article in Journal of biomedical optics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Mayna H NguyenQUEL Imaging, White River Junction, Vermont, United States.ORCID 0000-0002-7277-6049
Ethan P M LaRochelleQUEL Imaging, White River Junction, Vermont, United States.ORCID 0000-0002-7883-9987
Edwin A RobledoQUEL Imaging, White River Junction, Vermont, United States.
Alberto J RuizQUEL Imaging, White River Junction, Vermont, United States.ORCID 0000-0002-0577-369X

Funding

Phase II: Fluorescence guided surgery standardization toolsR44EB029804 · NIBIB · QUEL IMAGING LLC · PI LAROCHELLE, ETHAN PHILLIP MARSHALL · 2022 to 2023
$2.0M
TOPIC 421: BIOMIMETIC OPTICAL PHANTOMS FOR ADVANCING DEVELOPMENT OF FLUORESCENCE GUIDED SURGERY75N91021C00035 · NCI · QUEL IMAGING LLC · PI LAROCHELLE, ETHAN · 2021 to 2022
$455k
Fluorescence Guided Surgery Standardization ToolsR43EB029804 · NIBIB · QUEL IMAGING LLC · PI LAROCHELLE, ETHAN PHILLIP MARSHALL · 2020 to 2020
$266k
NCI NIH HHS 75N91021C00035NCI NIH HHS 75N91023C00052NIBIB NIH HHS R43 EB029804NIBIB NIH HHS R44 EB029804
6 · The paper itself

Abstract

Significance: As fluorescence-guided surgery (FGS) gains clinical adoption, robust and experimentally validated computational models for tissue fluorescence are increasingly essential. Although there have been several developments in modeling fluorescence with Monte Carlo simulations, the scope of the experimental validation has been limited in the parameters tested and phantoms used. Aim: We aim to present and experimentally validate a graphics processing unit (GPU)-accelerated, voxel-based Monte Carlo fluorescence framework capable of modeling varying fluorophore concentrations, optical properties, and complex three-dimensional (3D) geometries. Approach: A two-step approach (MCX-ExEm) based on Monte Carlo eXtreme was developed for simulating fluorescence. Both commercial reference targets and custom 3D-printed phantoms with well-characterized optical properties were imaged for varying parameters-including absorption, scattering, fluorophore concentrations, and geometries-and compared against simulations. Results: Strong agreement is observed between simulated and experimental fluorescence across all tested parameters. MCX-ExEm accurately captures nonlinear quenching at high fluorophore concentrations, variations driven by scattering and absorption, intensity scaling with volume, and depth-dependent attenuation and resolution. Minor deviations occur primarily under low-scattering or low-absorption regimes, where optical characterization presents greater uncertainties. Conclusions: By integrating experimentally validated simulations with a broad range of solid phantoms, this framework establishes a foundation for developing fluorescence digital twins, enabling faster and more systemic testing of fluorescence imaging systems. These findings can help accelerate the design and optimization of FGS and other fluorescence-based biomedical applications.

Indexed as

Monte Carlo MethodOptical ImagingPhantoms, ImagingComputer SimulationFluorescenceFluorescent DyesPrinting, Three-DimensionalReproducibility of ResultsScattering, RadiationSurgery, Computer-AssistedFluorescent Dyesexperimental validationfluorescenceMonte Carlo simulationsphantoms

Identifiers

PMID40443945
PMCPMC12119851

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.