Evidence map›Paper›PMID 40443036›Full record

ArticlePlant communications2025

UPL3 promotes BZR1 degradation, growth arrest, and seedling survival under starvation stress in Arabidopsis.

Zhenzhen Zhang, Hongliang Zhang, Lei Feng, Antong Wang, Zijie Lin, Cunyi Tan, Efren Gonzalez, Tarabryn Grismer, Shou-Ling Xu, Zhi-Yong Wang

Abstract read
In one paragraph

Article in Plant communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
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  5. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Zhenzhen ZhangDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA; Synthetic Biology Center, Haixia Institute of Science and Technology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou 350002, China; College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou 350002, China. Electronic address: zhangzhenzhen2779@qq.com.
Hongliang ZhangDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA.
Lei FengSynthetic Biology Center, Haixia Institute of Science and Technology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Antong WangSynthetic Biology Center, Haixia Institute of Science and Technology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Zijie LinSynthetic Biology Center, Haixia Institute of Science and Technology, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Cunyi TanCollege of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Efren GonzalezDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA.
Tarabryn GrismerDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA.
Shou-Ling XuDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA.
Zhi-Yong WangDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA 94305, USA. Electronic address: zywang24@stanford.edu.

Funding

Genetic Biochemical Studies of Signaling in Growth and AcclimationR01GM066258 · NIGMS · CARNEGIE INSTITUTION OF WASHINGTON, D.C. · PI ZHIYONG WANG · 2002 to 2026
$10.5M
Thermo Orbitrap Eclipse Tribrid with ETD and an Ultimate 3000 RSLCnano SystemS10OD030441 · OD · CARNEGIE INSTITUTION OF WASHINGTON, D.C. · PI XU, SHOULING · 2022 to 2022
$600k
NIGMS NIH HHS R01 GM066258NIH HHS S10 OD030441
6 · The paper itself

Abstract

Sugar-mediated regulation of hormone signaling is crucial for optimizing growth under normal conditions and ensuring survival during environmental stress. Previous studies have shown that sugar starvation induces the degradation of BRASSINAZOLE RESISTANT 1 (BZR1), the master transcription factor of the brassinosteroid (BR) signaling pathway, thereby inhibiting growth. However, the molecular mechanism linking sugar signaling to BZR1 degradation remains unknown. To identify proteins that mediate starvation-induced BZR1 degradation, we performed a quantitative proteomic analysis of the BZR1 interactome under starvation conditions and identified UBIQUITIN PROTEIN LIGASE 3 (UPL3) as a sugar-regulated protein that promotes BZR1 degradation and regulates growth and survival in response to sugar availability. upl3 mutants showed increased BZR1 accumulation and larger seedling size compared to the wild type under sugar-limiting conditions, but not when grown on sugar-containing medium, which indicates that UPL3 mediates BZR1 degradation and growth inhibition under sugar-limited conditions. Although upl3 mutations promoted growth under short-term starvation, they substantially reduced survival under long-term starvation. The enhanced growth phenotype of upl3 was also observed when target of rapamycin (TOR) was inactivated, but not when BR biosynthesis was blocked, suggesting that UPL3 acts downstream of sugar-TOR signaling to regulate BZR1 degradation. Furthermore, UPL3 protein levels increased post-transcriptionally in response to starvation and TOR inhibition, and decreased upon sugar treatment. Our study identifies UPL3 as a key molecular link between sugar signaling and BR signaling. We propose that sugar-TOR signaling inhibits UPL3 to promote BZR1 accumulation and growth, thereby optimizing plant growth and survival in response to sugar availability.

Indexed as

ArabidopsisArabidopsis ProteinsDNA-Binding ProteinsSeedlingsUbiquitin-Protein LigasesGene Expression Regulation, PlantProteolysisSignal TransductionStress, PhysiologicalArabidopsis ProteinsBZR1 protein, ArabidopsisDNA-Binding ProteinsUbiquitin-Protein LigasesbrassinosteroidBZR1starvation responsesugar signalingubiquitinationUPL3

Identifiers

PMID40443036
PMCPMC12281193

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.