Evidence map›Paper›PMID 40442718›Full record

Observational studyInternational breastfeeding journal2025

Viable bacterial communities in freshly pumped human milk and their changes during cold storage conditions.

Eliska Pivrncova, Jan Bohm, Vojtech Barton, Jana Klanova, Petra Borilova Linhartova

Abstract readObservational Study
In one paragraph

Observational study in International breastfeeding journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Eliska PivrncovaRECETOX, Faculty of Science, Masaryk University, Kotlarska 2, Brno, Czech Republic.
Jan BohmRECETOX, Faculty of Science, Masaryk University, Kotlarska 2, Brno, Czech Republic.
Vojtech BartonRECETOX, Faculty of Science, Masaryk University, Kotlarska 2, Brno, Czech Republic.
Jana KlanovaRECETOX, Faculty of Science, Masaryk University, Kotlarska 2, Brno, Czech Republic.
Petra Borilova LinhartovaRECETOX, Faculty of Science, Masaryk University, Kotlarska 2, Brno, Czech Republic. petra.linhartova@recetox.muni.cz.

Funding

Horizon 2020 Framework Programme 857560Ministerstvo Školství, Mládeže a Tělovýchovy LM2023069
6 · The paper itself

Abstract

backgroundHuman milk harbors diverse bacterial communities that contribute to infant health. Although pumping and storing milk is a common practice, the viable bacterial composition of pumped milk and the impact of storage practice on these bacteria remains under-explored. This metagenomic observational study aimed to characterize viable bacterial communities in freshly pumped human milk and its changes under different storage conditions.

methodsIn 2023, twelve lactating mothers from the CELSPAC: TNG cohort (Czech Republic) provided freshly pumped milk samples. These samples were stored under various conditions (refrigeration for 24 h, 48 h, or freezing for six weeks) and treated with propidium monoazide (PMA) to selectively identify viable cells. The DNA extracted from individual samples was subsequently analyzed using 16S rRNA amplicon sequencing on the Illumina platform.

resultsThe genera Streptococcus, Staphylococcus, Diaphorobacter, Cutibacterium, and Corynebacterium were the most common viable bacteria in fresh human milk. The median sequencing depth and Shannon index of fresh human milk samples treated with PMA (+ PMA) were significantly lower than in untreated (-PMA) samples (p < 0.05 for all), which was true also for each time point. Also, significant changes in these parameters were observed between fresh human milk samples and their paired frozen samples (p < 0.05), while no differences were found between fresh human milk samples and those refrigerated for up to 48 h (p > 0.05). Of specific genera, only + PMA frozen human milk samples showed a significant decrease in the central log-ratio transformed relative abundances of the genera Diaphorobacter and Cutibacterium (p < 0.05) in comparison to + PMA fresh human milk samples.

conclusionsThe study demonstrated that the bacterial profiles significantly differed between human milk samples treated with PMA, which represent only viable bacteria, and those untreated. While storage at 4 °C for up to 48 h did not significantly alter the overall diversity and composition of viable bacteria in human milk, freezing notably affected both the viability and relative abundances of some bacterial genera.

Indexed as

BacteriaFood StorageMicrobiotaMilk, HumanAdultAzidesFemaleFreezingHumansPropidiumRefrigerationRNA, Ribosomal, 16SAzidesPropidiumpropidium monoazideRNA, Ribosomal, 16S16S rRNAHuman milkMicrobiomeMilk expressionNext-generation sequencingPropidium monoazidePumped milkStorageViable bacteria

Identifiers

PMID40442718
PMCPMC12123816

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.