Evidence map›Paper›PMID 40442591›Full record

ArticleBMC genomics2025

Transcriptomic and proteomic studies of body size and carcass traits and the longest dorsal muscle in Tibetan sheep.

Dehui Liu, Xue Li, Lei Wang, Quanbang Pei, Jincai Zhao, De Sun, Qianben Ren, Buying Han, Hanjing Jiang, Wenkui Zhang and 7 more

Abstract read
In one paragraph

Article in BMC genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Dehui LiuQinghai Provincial Key Laboratory of Animal Ecological Genomics, Key Laboratory of Adaptation and Evolution of Plateau Biota, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, No. 23 Xining Road, Xining, Qinghai, 810001, China.
Xue LiQinghai Provincial Key Laboratory of Animal Ecological Genomics, Key Laboratory of Adaptation and Evolution of Plateau Biota, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, No. 23 Xining Road, Xining, Qinghai, 810001, China.
Lei WangQinghai Sheep Breeding and Promotion Service Center, Gangcha, Qinghai, 812300, China.
Quanbang PeiQinghai Sheep Breeding and Promotion Service Center, Gangcha, Qinghai, 812300, China.
Jincai ZhaoQinghai Sheep Breeding and Promotion Service Center, Gangcha, Qinghai, 812300, China.
De SunAnimal Husbandry and Veterinary Station of Huzhu County of Qinghai Province, Huzhu, 810500, Qinghai, China.
Qianben RenQinghai Sheep Breeding and Promotion Service Center, Gangcha, Qinghai, 812300, China.
Buying HanQinghai Provincial Key Laboratory of Animal Ecological Genomics, Key Laboratory of Adaptation and Evolution of Plateau Biota, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, No. 23 Xining Road, Xining, Qinghai, 810001, China.
Hanjing JiangQinghai Livestock and Poultry Genetic Resources Protection and Utilization Center, Xining, 810000, China.
Wenkui ZhangQinghai Sheep Breeding and Promotion Service Center, Gangcha, Qinghai, 812300, China.
Rong LiMinhe County Zongbao Township Animal Husbandry and Veterinary Station, Minhe, Qinghai, 810800, China.
Guoxiang BaoMinhe County Machangyuan Township Animal Husbandry and Veterinary Station, Minhe, Qinghai, 810800, China.
Song WangQinghai Provincial Key Laboratory of Animal Ecological Genomics, Key Laboratory of Adaptation and Evolution of Plateau Biota, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, No. 23 Xining Road, Xining, Qinghai, 810001, China.
Fei TianQinghai Provincial Key Laboratory of Animal Ecological Genomics, Key Laboratory of Adaptation and Evolution of Plateau Biota, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, No. 23 Xining Road, Xining, Qinghai, 810001, China.
Sijia LiuQinghai Provincial Key Laboratory of Animal Ecological Genomics, Key Laboratory of Adaptation and Evolution of Plateau Biota, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, No. 23 Xining Road, Xining, Qinghai, 810001, China.
Kai ZhaoQinghai Provincial Key Laboratory of Animal Ecological Genomics, Key Laboratory of Adaptation and Evolution of Plateau Biota, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, No. 23 Xining Road, Xining, Qinghai, 810001, China.
Dehong TianQinghai Provincial Key Laboratory of Animal Ecological Genomics, Key Laboratory of Adaptation and Evolution of Plateau Biota, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, No. 23 Xining Road, Xining, Qinghai, 810001, China. tiandehong@nwipb.cas.cn.

Funding

Natural Science Foundation of Qinghai Province [2022-ZJ-901]
6 · The paper itself

Abstract

backgroundTibetan sheep represent valuable genetic resources on the Tibetan Plateau, and their body size and carcass traits serve as crucial foundations for breeding program development and breeding effects evaluation. The study of body size and carcass characteristics of Tibetan sheep helps to understand their process of genetic regulation.

resultThe body size traits, carcass traits, and muscle fiber structure of plateau-type Tibetan and Zhashijia sheep were compared. Zhashijia ewes displayed considerably higher carcass weight and body size than plateau-type ewes. Additionally, it was observed that Zhashijia rams exhibited significantly greater eye muscle area, chest width, and muscle fiber perimeter in comparison to plateau-type rams. And Glycogen staining results showed that the glycogen content of the plateau-type Tibetan sheep was significantly higher than that of the Zhashijia sheep. Through transcriptomic and proteomic analyses, we identified 366 genes that showed differential expression in the ram group and 248 proteins with differential expression. In the ewe group, we found 623 differentially expressed genes (DEGs) and 624 differentially expressed proteins (DEPs). Among these, eleven genes and fourteen proteins were associated with body size and carcass quality. These genes and proteins showed significant enrichment in the PPAR signaling pathway and protein digestion and absorption. Furthermore, employing weighted gene co-expression network analysis (WGCNA) allowed us to identify twelve genes that are pivotal in regulating body size and carcass. Finally, RT-qPCR validation confirmed the reliability of our RNA-Seq results.

conclusionThe findings of this study contribute to a deeper comprehension of the morphological characteristics and carcass traits of Tibetan sheep, thereby establishing a robust scientific basis for the selective breeding of novel sheep breeds with enhanced growth performance and superior meat production capacity.

Indexed as

Body SizeGene Expression ProfilingMuscle, SkeletalProteomeProteomicsTranscriptomeAnimalsFemaleSheepTibetProteomeBody size traitsCarcass traitsProteomicsTibetan sheepTranscriptomicsWGCNA

Identifiers

PMID40442591
PMCPMC12121134

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.