Evidence map›Paper›PMID 40442317›Full record

ArticleNature structural & molecular biology2025

Structural basis of GluK2 kainate receptor activation by a partial agonist.

Guadalupe Segura-Covarrubias, Changping Zhou, Nebojša Bogdanović, Lisa Zhang, Nami Tajima

Abstract read
In one paragraph

Article in Nature structural & molecular biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Sialylation in the nervous system: Functions and mechanisms.The Journal of biological chemistry · 2026
    Review
  5. Article
  6. Review
  7. Article
  8. Activation of kainate receptor GluK2-Neto2 complex.Nature structural & molecular biology · 2025
    Article
  9. Structure and gating of kainate receptors.Frontiers in pharmacology · 2025
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Guadalupe Segura-Covarrubias *Department of Physiology and Biophysics, Case Western Reserve University School of Medicine, Cleveland, OH, USA.ORCID http://orcid.org/0000-0002-0979-181X
Changping Zhou *Department of Physiology and Biophysics, Case Western Reserve University School of Medicine, Cleveland, OH, USA.ORCID http://orcid.org/0009-0007-0196-8784
Nebojša Bogdanović *Department of Physiology and Biophysics, Case Western Reserve University School of Medicine, Cleveland, OH, USA.ORCID http://orcid.org/0000-0002-6811-2848
Lisa ZhangDepartment of Physiology and Biophysics, Case Western Reserve University School of Medicine, Cleveland, OH, USA.
Nami TajimaDepartment of Physiology and Biophysics, Case Western Reserve University School of Medicine, Cleveland, OH, USA. nxt193@case.edu.ORCID http://orcid.org/0000-0001-7773-7391

Funding

The Stanford-SLAC CryoEM Center supplementU24GM129541 · NIGMS · STANFORD UNIVERSITY · PI CHIU, WAH, HEDMAN, BRITT · 2018 to 2023
$54.8M
Structure and Function of native kainate-type ionotropic glutamate receptor complexesR35GM147266 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI NAMI TAJIMA · 2022 to 2026
$2.1M
Acquisition of 200kV Glacios Cryo Transmission Electron MicroscopeS10OD032437 · OD · CASE WESTERN RESERVE UNIVERSITY · PI CHAKRAPANI, SUDHA · 2022 to 2022
$2.0M
High-End Instrumentation (HEI) Grant Program (S10)S10OD023436 · OD · CLEVELAND CLINIC LERNER COM-CWRU · PI WILLARD, BELINDA BELLE · 2017 to 2017
$873k
NIGMS NIH HHS R35 GM147266NIGMS NIH HHS U24 GM129541NIH HHS S10 OD023436NIH HHS S10 OD032437
6 · The paper itself

Abstract

Kainate receptors (KARs) belong to the family of ionotropic glutamate receptors that regulate neurotransmitter release and excitatory synaptic transmission in the central nervous system. Despite their critical roles in synaptic signaling and disease, the detailed gating mechanisms of KARs are not completely understood. Here we present cryo-electron microscopy structures of homomeric rat GluK2 KAR in an unliganded apo state and in complexes with a partial agonist, domoate. Partial agonist-bound GluK2 populates multiple conformations, including intermediate and desensitized states. Moreover, we demonstrate that the N-glycans at the amino-terminal domain-ligand binding domain (LBD) interface modulate receptor gating properties by interfering with cation binding at the LBD dimer interface. Together, these results provide insights into the unique gating mechanisms of KARs.

Indexed as

Kainic Acid ReceptorsAnimalsBinding SitesCryoelectron MicroscopyGluK2 Kainate ReceptorModels, MolecularProtein BindingProtein ConformationProtein DomainsRatsGluK2 Kainate ReceptorKainic Acid Receptors

Identifiers

PMID40442317
PMCPMC13426299

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.