Evidence map›Paper›PMID 40442080›Full record

ArticleScientific data2025

Chromosome-level genome assembly of Paracoccus marginatus based on PacBio and Hi-C technologies.

Jiufeng Wei, Jinying Xue, Xuejie Shen, Gaoxiang Zhang, Qing Zhao, Yunyun Lu, Minmin Niu, Wei Ji

Abstract read
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Jiufeng WeiCollege of Plant Protection, Shanxi Agricultural University, Jinzhong, Shanxi, 030801, China.
Jinying XueCollege of Plant Protection, Shanxi Agricultural University, Jinzhong, Shanxi, 030801, China.
Xuejie ShenCollege of Plant Protection, Shanxi Agricultural University, Jinzhong, Shanxi, 030801, China.
Gaoxiang ZhangCollege of Horticulture, Shanxi Agricultural University, Jinzhong, Shanxi, 030801, China.
Qing ZhaoCollege of Plant Protection, Shanxi Agricultural University, Jinzhong, Shanxi, 030801, China.
Yunyun LuCollege of Plant Protection, Shanxi Agricultural University, Jinzhong, Shanxi, 030801, China.
Minmin NiuCollege of Plant Protection, Shanxi Agricultural University, Jinzhong, Shanxi, 030801, China. niuminmin@nwsuaf.edu.cn.
Wei JiCollege of Horticulture, Shanxi Agricultural University, Jinzhong, Shanxi, 030801, China. jiweiputao@163.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Invasive species pose a serious threat to ecosystems and biodiversity, leading to considerable economic losses for countries. The papaya mealybug (Paracoccus marginatus), is a prominent invasive pest that affects over 200 plant species and has been recorded in more than 60 countries and regions.Here, the chromosome-level genome of P. marginatus was assembled using PacBio and Hi-C technologies. The resulting genome, with a total size of 213.81 Mb, was organized into four chromosomes. The contig and scaffold N50 values were 20.2 Mb and 48.01 Mb, respectively. The genome assembly attained a BUSCO completeness score of 95.5%, and CEGMA analysis showed that 99.56% of the genome was thoroughly annotated. It includes 13,367 predicted protein-coding genes, with 49.26% of the assembly identified as repetitive sequences. This high-quality genome serves as a valuable resource for a range of research fields, such as population genetics, evolutionary studies, invasive species management, and comparative genomics within Hemiptera and other insect groups.

Indexed as

Genome, InsectParacoccusAnimalsGenomics

Identifiers

PMID40442080
PMCPMC12122897

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.