Evidence map›Paper›PMID 40440538›Full record

ArticleJournal of chemical information and modeling2025

Computational Design of Lysine Targeting Covalent Binders Using Rosetta.

Barr Tivon, Jan Wiese, Matthias P Müller, Ronen Gabizon, Daniel Rauh, Nir London

Abstract read
In one paragraph

Article in Journal of chemical information and modeling, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Barr TivonDepartment of Chemical and Structural Biology, The Weizmann Institute of Science, Rehovot 7610001, Israel.
Jan WieseDepartment of Chemistry and Chemical Biology, TU Dortmund University and Drug Discovery Hub Dortmund (DDHD), Zentrum für Integrierte Wirkstoffforschung (ZIW), Otto-Hahn-Strasse 4a, Dortmund 44227, Germany.
Matthias P MüllerDepartment of Chemistry and Chemical Biology, TU Dortmund University and Drug Discovery Hub Dortmund (DDHD), Zentrum für Integrierte Wirkstoffforschung (ZIW), Otto-Hahn-Strasse 4a, Dortmund 44227, Germany.ORCID 0000-0002-1529-8933
Ronen GabizonDepartment of Chemical and Structural Biology, The Weizmann Institute of Science, Rehovot 7610001, Israel.ORCID 0000-0002-3626-5073
Daniel RauhDepartment of Chemistry and Chemical Biology, TU Dortmund University and Drug Discovery Hub Dortmund (DDHD), Zentrum für Integrierte Wirkstoffforschung (ZIW), Otto-Hahn-Strasse 4a, Dortmund 44227, Germany.
Nir LondonDepartment of Chemical and Structural Biology, The Weizmann Institute of Science, Rehovot 7610001, Israel.ORCID 0000-0003-2687-0699

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chemical probes that form a covalent bond with their target protein have been established as a powerful tool for investigating proteins and modulating their activity, but until recently were mostly targeting cysteine residues. Covalent binders that target lysine residues are increasingly reported. Covalent binding to lysine involves challenges such as the increased p

Indexed as

Drug DesignLysineHumansLigandsMolecular Docking SimulationProtein BindingLigandsLysine

Identifiers

PMID40440538
PMCPMC12152945

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.