Evidence map›Paper›PMID 40440308›Full record

ArticlePloS one2025

Effects of pesticide application on soil bacteria community structure in a cabbage-based agroecosystem in Ghana.

Sefa Peprah, Patrick Addo-Fordjour, Bernard Fei-Baffoe, Kwadwo Boampong, Silas Wintuma Avicor, James Damsere-Derry

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Sefa PeprahDepartment of Environmental Science, College of Science, Kwame Nkrumah University of Science and Technology, Kumasi, Ghana.ORCID 0009-0003-6919-7761
Patrick Addo-FordjourDepartment of Theoretical and Applied Biology, College of Science, Kwame Nkrumah University of Science and Technology, Kumasi, Ghana.
Bernard Fei-BaffoeDepartment of Environmental Science, College of Science, Kwame Nkrumah University of Science and Technology, Kumasi, Ghana.
Kwadwo BoampongDepartment of Theoretical and Applied Biology, College of Science, Kwame Nkrumah University of Science and Technology, Kumasi, Ghana.
Silas Wintuma AvicorEntomology Division, Cocoa Research Institute of Ghana, New Tafo-Akim.ORCID 0000-0002-5806-6892
James Damsere-DerryCouncil for Scientific and Industrial Research, Building Road and Research Institute, Ghana.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Modern sustainable agriculture often relies on pesticide application, which may unintentionally affect non-target soil microorganisms. This study assessed the effects of commonly used pesticides in cabbage cultivation on bacteria diversity, composition, and abundance in soils from some farming communities in Bosome Freho District, Ghana. The pesticides included a neonicotinoid (acetamiprid), microbial agents (Pieris rapae granulosis virus+ Bacillus thuringiensis), avermectin (emamectin benzoate), and pyrrole (chlorfenapyr). Soil samples were collected from non-contaminated (NCS), abandoned pesticide-contaminated (AB-PCS) and actively pesticide-contaminated (AC-PCS) soils. Bacteria communities were analysed in the soil at phylum, class, order, family, genus, and species levels using 16S rRNA gene sequencing. The soils were also analyzed for physicochemical properties. Our results showed a decrease in bacteria diversity and abundance in pesticide-contaminated soils in the following order: NCS > AB-PCS > AC-PCS. Sorensen's coefficient of similarity indicated major shifts in bacteria taxa composition due to pesticide contamination. In NCS, Pseudomonas veronii, Bacillus sp., and Prevotella albensis were the most abundant species, while Rhodoplanes elegans and Nostocoida limicola dominated AB-PCS. In AC-PCS, R. elegans, Gemmata obscuriglobus, Nitrospira calida, and N. limicola were the most abundant species. The abundance of Bacillus sp., P. veronii, and P. albensis decreased in the contaminated soils, while the abundance of N. calida, Cystobacter sp., Pedomicrobium australicum and Byssovorax cruenta was higher in the contaminated soils. Key genera involved in nutrient cycling such as Clostridium, Bacillus, Prevotella, Pseudomonas, and Arthrobacter, declined in abundance in pesticide exposed soils. In contrast, an increase in abundance of various taxa such as Pedomicrobium, Hyphomicrobiaceae, Pirellulaceae, Comamonadaceae, Nitrospirales, Nitrospira, Anaerolineae, Planctomycetes, Acidobacteriaí and Nitrospirae was observed in the contaminated soils. These bacteria may possess bioremediation potential that could be exploited for environmental remediation. Soil physicochemical properties and nutrient levels varied across the three soil treatments, with potential implications for bacteria community structure.

Indexed as

BacteriaBrassicaPesticidesSoil MicrobiologySoil PollutantsAgricultureGhanaRNA, Ribosomal, 16SSoilPesticidesRNA, Ribosomal, 16SSoilSoil Pollutants

Identifiers

PMID40440308
PMCPMC12121791

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.