Evidence map›Paper›PMID 40439833›Full record

ReviewFunctional & integrative genomics2025

Decoding fungal communication networks: molecular signaling, genetic regulation, and ecological implications.

Shumila Ishfaq, Hadiqa Anum, Tayyaba Shaheen, Sana Zulfiqar, Anila Ishfaq, Arslan Anjum, Umera Ramzan, Amna Rafiq, Mehboob-Ur-Rahman, Wei Guo

Erratum issuedAbstract readReview
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In one paragraph

Review in Functional & integrative genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Shumila IshfaqInstitute of Food Science and Technology, Key Laboratory of Agro-products Quality and Safety Control in Storage and Transport Process, Ministry of Agriculture and Rural Affairs, Chinese Academy of Agricultural Sciences, Beijing, 100193, P.R. China.
Hadiqa AnumInstitute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences, Beijing, China.
Tayyaba ShaheenDepartment of Bioinformatics and Biotechnology, Government College University, Faisalabad, Pakistan.
Sana ZulfiqarPlant Genomics and Molecular Breeding Laboratory, National Institute for Biotechnology and Genetic Engineering College, Pakistan Institute of Engineering and Applied Sciences (NIBGE- C, PIEAS), Faisalabad, Punjab, 38000, Pakistan.
Anila IshfaqDepartment of Economics, Government College University, Faisalabad, Pakistan.
Arslan AnjumInstitute of Food Science and Technology, Key Laboratory of Agro-products Quality and Safety Control in Storage and Transport Process, Ministry of Agriculture and Rural Affairs, Chinese Academy of Agricultural Sciences, Beijing, 100193, P.R. China.
Umera RamzanDepartment of Plant Pathology, University of Agriculture, Faisalabad, Pakistan.
Amna RafiqInstitute of Food Science and Technology, Key Laboratory of Agro-products Quality and Safety Control in Storage and Transport Process, Ministry of Agriculture and Rural Affairs, Chinese Academy of Agricultural Sciences, Beijing, 100193, P.R. China.
Mehboob-Ur-RahmanPlant Genomics and Molecular Breeding Laboratory, National Institute for Biotechnology and Genetic Engineering College, Pakistan Institute of Engineering and Applied Sciences (NIBGE- C, PIEAS), Faisalabad, Punjab, 38000, Pakistan. mehboob_pbd@yahoo.com.
Wei GuoInstitute of Food Science and Technology, Key Laboratory of Agro-products Quality and Safety Control in Storage and Transport Process, Ministry of Agriculture and Rural Affairs, Chinese Academy of Agricultural Sciences, Beijing, 100193, P.R. China. guowei01@caas.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fungal communication networks regulate essential biological processes, enabling fungi to adapt to environmental changes, coordinate development, and establish interactions within microbial communities. These networks are mediated by diverse signaling molecules, including volatile organic compounds (VOCs), peptide signaling molecules, and quorum-sensing molecules, which facilitate intra- and interspecies communication. The intricate regulation of these signals occurs through specialized signal transduction pathways such as G-protein-coupled receptors (GPCRs) and two-component regulatory systems, allowing fungi to sense external cues and modulate their physiological responses. Genetic mechanisms also play a critical role in fungal communication, influencing community dynamics through regulatory genes governing hyphal fusion, pheromone signaling, and secondary metabolite biosynthesis. Crosstalk between these signaling pathways is further modulated by epigenetic modifications, which fine-tune gene expression in response to environmental conditions. The integration of these molecular networks shapes fungal interactions, impacting resource acquisition, symbiosis, and pathogenicity. Additionally, fungal communication has significant ecological and evolutionary implications, contributing to niche establishment, microbial competition, and host-pathogen interactions. Despite significant progress in understanding fungal communication, key knowledge gaps remain regarding the interplay between signaling molecules, genetic regulation, and environmental adaptation. Future research should focus on unraveling the molecular mechanisms underlying fungal signaling networks and their potential applications in biotechnology, agriculture, and medicine. Harnessing fungal communication could lead to novel strategies for improving crop protection, developing antifungal therapies, and optimizing industrial fermentation processes. This review synthesizes recent advancements in fungal signaling research, providing a comprehensive perspective on its complexity and evolutionary significance.

Indexed as

FungiGene Expression Regulation, FungalSignal TransductionQuorum SensingFungal crosstalkGenetic interactionsQuorum sensingSignal transduction

Identifiers

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.