Evidence map›Paper›PMID 40439324›Full record

ArticlePlant & cell physiology2025

Flower color variations are determined by betalain biosynthetic genes in Portulaca umbraticola.

Chisaki Sumi, Shogo Sugiura, Motoyuki Ishimori, Yuma Tabayashi, Yohei Higuchi, Michio Shibata

Abstract read
In one paragraph

Article in Plant & cell physiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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0cells of the map it votes in
2citing papers in PubMed
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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Plants (Basel, Switzerland) · 2026
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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Chisaki SumiDepartment of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan.
Shogo SugiuraDepartment of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan.
Motoyuki IshimoriDepartment of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan.
Yuma TabayashiDepartment of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan.
Yohei HiguchiDepartment of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan.ORCID 0000-0002-1380-7044
Michio ShibataDepartment of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan.

Funding

Ministry of Education, Culture, Sports, Science and Technology (MEXT) of Japan
6 · The paper itself

Abstract

Portulaca umbraticola, an important summer garden plant, belongs to the family Portulacaceae within the order Caryophyllales. Unlike most plants that produce anthocyanins, species in Caryophyllales typically produce betalains, pigments divided into yellow betaxanthins and reddish-purple betacyanins. Previous research on a limited number of plants has identified five key enzymes responsible for betalain biosynthesis: cytochrome P450-α, β (CYP76AD-α, β), DOPA 4,5-dioxygenase, cyclo-DOPA-5-O-glucosyltransferase, and betanidin 5-O-glucosyltransferase. These genes, however, had not been previously identified in P. umbraticola, and the molecular basis for its flower color variation remained unclear. In this study, we identified these genes in P. umbraticola (PuDOD1, PuCYP76AD1/3 (α), PuCYP76AD2 (β), PucDOPA5GT, and PuB5GT) and demonstrated their functions through transient and stable gene expression in non-betalain-producing plants. Simultaneous expression of PuDOD1, PuCYP76AD1, and PucDOPA5GT (or PuB5GT), led to the accumulation of betacyanin, while co-expression of PuDOD1 and PuCYP76AD2 (or PuCYP76AD3) led to betaxanthin accumulation. PuCYP76AD3 belongs to the CYP76AD-α sub-clade, but lacks 3,4-dihydroxy-L-phenyalanine oxidase activity and contributes to betaxanthin biosynthesis. We also tested the correlation between the diverse flower colors of P. umbraticola and the expression levels of these genes, and found that most flower color variation, determined by the ratio of betacyanin and betaxanthin, can be explained by the combination of varying expression levels of these genes. Here, we elucidated the basic pathway of betalain biosynthesis for the first time in Portulacaceae and indicated that the expression of betalain biosynthetic genes significantly influences flower color in betalain-producing plants.

Indexed as

BetalainsCaryophyllalesFlowersGenes, PlantPigmentationBiosynthetic PathwaysGene Expression Regulation, PlantPhylogenyPlant ProteinsBetalainsPlant ProteinsbetalainscDOPA5GTCYP76ADDODornamental traitsPortulaca umbraticola

Identifiers

PMID40439324
PMCPMC12344092

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.