Evidence map›Paper›PMID 40439032›Full record

ArticleLab on a chip2025

Denaturation methods for reusable magnetic biosensors.

Suhyeon Park, Songeun Kim, Shan X Wang, Jung-Rok Lee

Abstract read
In one paragraph

Article in Lab on a chip, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Suhyeon ParkDepartment of Mechanical and Biomedical Engineering, Ewha Womans University, Seoul 03760, Republic of Korea.
Songeun KimDepartment of Mechanical and Biomedical Engineering, Ewha Womans University, Seoul 03760, Republic of Korea.
Shan X WangDepartment of Materials Science and Engineering, Stanford University, Stanford, California 94305, USA.
Jung-Rok LeeDepartment of Mechanical and Biomedical Engineering, Ewha Womans University, Seoul 03760, Republic of Korea.ORCID 0000-0002-3518-3965

Funding

Rapid and affordable magneto-nanosensors for ctDNA-guided lung cancer managementR01CA257843 · NCI · STANFORD UNIVERSITY · PI WANG, SHAN X. · 2021 to 2024
$2.2M
MagSToNE - a magnetic system for kidney stone fragment eliminationR21DK131776 · NIDDK · STANFORD UNIVERSITY · PI LIAO, JOSEPH C, WANG, SHAN X. · 2021 to 2022
$435k
NCI NIH HHS R01 CA257843NIDDK NIH HHS R21 DK131776
6 · The paper itself

Abstract

Nanoscale biosensors for sensitive DNA detection require advanced and precise fabrication techniques, which make them highly expensive and result in low yield rates. For such DNA biosensors, sensor regeneration is highly desirable. In this study, we investigated the effectiveness of various denaturants, including ultrapure water, urea solution, tris-ethylenediaminetetraacetic acid buffer, and dimethyl sulfoxide (DMSO), for the denaturation of target DNAs hybridized to probe DNAs on sensors. We used giant magnetoresistive (GMR) biosensors equipped with a temperature control unit in conjunction with magnetic nanoparticles. To examine the effect of DNA sequence on denaturation efficiency, 14 orthogonal DNA pairs were designed and tested. Furthermore, to maintain a consistent sensitivity in subsequent measurements, we evaluated the integrity of the probe DNAs on the sensors after denaturation. Among all the denaturants tested, 40% DMSO demonstrated excellent performance in the denaturation of probe DNAs covalently bonded to the sensors, without any heating process. This optimal denaturant can be applied to other planar DNA biosensor systems; moreover, GMR biosensors can facilitate the evaluation of newly developed denaturants.

Indexed as

Biosensing TechniquesDNANucleic Acid DenaturationDimethyl SulfoxideMagnetite NanoparticlesUreaDimethyl SulfoxideDNAMagnetite NanoparticlesUrea

Identifiers

PMID40439032
PMCPMC12120827

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.