Evidence map›Paper›PMID 40437760›Full record

ArticleMolecular plant2025

ERFVIIs as transducers of oxygen-sensing in the evolution of land plant response to hypoxia.

Laura Dalle Carbonare, Hans van Veen, Vinay Shukla, Monica Perri, Liem Bui, Michael J Holdsworth, Francesco Licausi

Abstract read
In one paragraph

Article in Molecular plant, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Review
  5. HNature · 2026
    Article
  6. Article
  7. Review
  8. A synthetic ERFVII-dependent circuit in yeast sheds light on the regulation of early hypoxic responses of plants.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  9. Review
  10. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Laura Dalle CarbonareSchool of Biosciences, University of Nottingham, Loughborough LE12 5RD, UK; Department of Biology, University of Oxford, Oxford OX1 3RB, UK.
Hans van VeenGroningen Institute of Evolutionary Life Sciences, University of Groningen, Groningen, the Netherlands.
Vinay ShuklaDepartment of Biology, University of Oxford, Oxford OX1 3RB, UK.
Monica PerriDepartment of Biology, University of Oxford, Oxford OX1 3RB, UK.
Liem BuiBiotechnology Research and Development Institute, Can Tho University, Can Tho, Vietnam.
Michael J HoldsworthSchool of Biosciences, University of Nottingham, Loughborough LE12 5RD, UK. Electronic address: michael.holdsworth@nottingham.ac.uk.
Francesco LicausiDepartment of Biology, University of Oxford, Oxford OX1 3RB, UK. Electronic address: francesco.licausi@biology.ox.ac.uk.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The transcriptional response to low oxygen (hypoxia) in flowering plants is mediated by group VII Ethylene Response Factor (ERFVII) transcription factors, whose proteolysis is oxygen-dependent via the PLANT CYSTEINE OXIDASE (PCO) N-degron pathway. However, when and how this hypoxia response evolved in land plants remains unknown. In this study, we investigated the conservation and divergence of transcriptional responses to hypoxia across major land plant clades. We found that the induction of gene functions associated with glycolysis and fermentation is part of a conserved response across all land plant divisions.Evolutinary analyses suggest that ERFVIIs emerged in the last common ancestor of vascular plants with true roots, coinciding with the evolution of oxygen-dependent destabilization mechanisms that regulate hypoxia-adaptive genes. Proteins from other ERF groups have been independently recruited multiple times in different clades as substrates of the PCO N-degron pathway. Taken together, our results demonstrate that the response of land plants to hypoxia has been refined in derived clades through the evolution of ERFVIIs as transcriptional transducers, which occurred concurrently with the emergence of vascular systems and roots as foraging structures in hypoxic soils.

Indexed as

EmbryophytaOxygenPlant ProteinsTranscription FactorsEvolution, MolecularGene Expression Regulation, PlantPhylogenyOxygenPlant ProteinsTranscription FactorsERFVIIhypoxia-responsive orthogroupsN-degron pathwayoxygen-sensingplant evolutiontranscription factor

Identifiers

PMID40437760
PMCPMC13448761

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.