Evidence map›Paper›PMID 40437550›Full record

ArticleGenome biology2025

Non-cyanobacterial diazotrophs support the survival of marine microalgae in nitrogen-depleted environment.

Udita Chandola, Marinna Gaudin, Camille Trottier, Louis-Josselin Lavier-Aydat, Eric Manirakiza, Samuel Menicot, Erik Jörg Fischer, Isabelle Louvet, Thomas Lacour, Timothée Chaumier and 4 more

Abstract read
In one paragraph

Article in Genome biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Systematic Review: Long-Read Sequencing in Algal Studies.International journal of molecular sciences · 2026
    Pooled it
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Udita ChandolaUMR 6286, F-44000, Nantes Université, CNRS, Nantes, US2B, France.
Marinna GaudinUMR 6004, Nantes Université, École Centrale Nantes, CNRS, Nantes, LS2 N, France.
Camille TrottierUMR 6286, F-44000, Nantes Université, CNRS, Nantes, US2B, France.
Louis-Josselin Lavier-AydatUMR 6286, F-44000, Nantes Université, CNRS, Nantes, US2B, France.
Eric ManirakizaUMR 6286, F-44000, Nantes Université, CNRS, Nantes, US2B, France.
Samuel MenicotUMR 6286, F-44000, Nantes Université, CNRS, Nantes, US2B, France.
Erik Jörg FischerInstitute for Inorganic and Analytical Chemistry, Friedrich Schiller University Jena, Lessingstrasse 8, Jena, 7743, Germany.
Isabelle LouvetUMR 6230, Nantes Université, CNRS, CEISAM, Nantes, 44000, France.
Thomas LacourPHYTOX, PHYSALG, Rue de L'Ile d'Yeu, Nantes Cedex 03, BP2110544311, France.
Timothée ChaumierUMR 6286, F-44000, Nantes Université, CNRS, Nantes, US2B, France.
Atsuko TanakaDepartment of Chemistry, Biology and Marine Science, Faculty of Science, University of the Ryukyus, Okinawa, 903-0213, Japan.
Georg PohnertInstitute for Inorganic and Analytical Chemistry, Friedrich Schiller University Jena, Lessingstrasse 8, Jena, 7743, Germany.
Samuel ChaffronUMR 6004, Nantes Université, École Centrale Nantes, CNRS, Nantes, LS2 N, France.
Leïla TirichineUMR 6286, F-44000, Nantes Université, CNRS, Nantes, US2B, France. tirichine-l@univ-nantes.fr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundNon-cyanobacteria diazotrophs (NCDs) are shown to dominate in surface waters shifting the long-held paradigm of cyanobacteria dominance. This raises fundamental questions on how these putative heterotrophic bacteria thrive in sunlit oceans. The absence of laboratory cultures of these bacteria significantly limits our ability to understand their behavior in natural environments and, consequently, their contribution to the marine nitrogen cycle.

resultsHere, via a multidisciplinary approach, we identify the presence of NCDs within the phycosphere of the model diatom Phaeodactylum tricornutum (Pt), which sustain the survival of Pt in nitrogen-depleted conditions. Through bacterial metacommunity sequencing and genome assembly, we identify multiple NCDs belonging to the Rhizobiales order, including Bradyrhizobium, Mesorhizobium, Georhizobium, and Methylobacterium. We demonstrate the nitrogen-fixing ability of PtNCDs through in silico identification of nitrogen fixation genes and by other experimental assays. We show the wide occurrence of this type of interactions with the isolation of NCDs from other microalgae, their identification in the environment, and their predicted associations with photosynthetic microalgae.

conclusionsOur study underscores the importance of microalgae interactions with NCDs to support nitrogen fixation. This work provides a unique model Pt-NCDs to study the ecology of this interaction, advancing our understanding of the key drivers of global marine nitrogen fixation.

Indexed as

DiatomsMicroalgaeNitrogenNitrogen FixationPhylogenyNitrogenBiological nitrogen fixationEukaryote-prokaryote interactionsMicroalgaeNon-cyanobacterial diazotrophsPhaeodactylum tricornutumRhizobiales

Identifiers

PMID40437550
PMCPMC12117797

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.