Evidence map›Paper›PMID 40435287›Full record

ArticlePLoS biology2025

The m5C reader Ybx1 regulates embryonic cortical neurogenesis by promoting progenitor cell cycle progression.

Jian Zhang, Pengfei Che, Zhuoxuan Yang, Pingrui Zhang, Yuxuan Shui, Xibin Lu, Jiuzhou Xu, Yuanchu She, Yanbo Zhang, Jun Yu and 1 more

Abstract read
In one paragraph

Article in PLoS biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Jian ZhangDepartment of Neuroscience, School of Life Sciences, Southern University of Science and Technology, Shenzhen, Guangdong, China.
Pengfei CheDepartment of Neuroscience, School of Life Sciences, Southern University of Science and Technology, Shenzhen, Guangdong, China.
Zhuoxuan YangDepartment of Neuroscience, School of Life Sciences, Southern University of Science and Technology, Shenzhen, Guangdong, China.
Pingrui ZhangDepartment of Neuroscience, School of Life Sciences, Southern University of Science and Technology, Shenzhen, Guangdong, China.
Yuxuan ShuiDepartment of Neuroscience, School of Life Sciences, Southern University of Science and Technology, Shenzhen, Guangdong, China.
Xibin LuThe Core Research Facilities, Southern University of Science and Technology, Shenzhen, Guangdong, China.
Jiuzhou XuDepartment of Neuroscience, School of Life Sciences, Southern University of Science and Technology, Shenzhen, Guangdong, China.
Yuanchu SheDepartment of Neuroscience, School of Life Sciences, Southern University of Science and Technology, Shenzhen, Guangdong, China.
Yanbo ZhangDepartment of Neuroscience, School of Life Sciences, Southern University of Science and Technology, Shenzhen, Guangdong, China.
Jun YuDepartment of Neuroscience, School of Life Sciences, Southern University of Science and Technology, Shenzhen, Guangdong, China.
Sheng-Jian JiDepartment of Neuroscience, School of Life Sciences, Southern University of Science and Technology, Shenzhen, Guangdong, China.ORCID 0000-0003-3380-258X

Funding

Key-Area Research and Development Program of Guangdong ProvinceNational Natural Science Foundation of ChinaShenzhen-Hong Kong Institute of Brain Science-Shenzhen Fundamental Research InstitutionsShenzhen Medical Research FundShenzhen Municipal Natural Science Fund Key Project
6 · The paper itself

Abstract

The reversible epitranscriptomic mark, 5-methylcytosine (m5C) modification, is implicated in numerous cellular processes, but its role in neural development remains largely unexplored. In this study, we discovered high expression of the m5C reader Ybx1 in the developing mouse cortex. To elucidate its role in cortical development, Ybx1 was ablated in embryonic cortical neural stem cells (NSCs). Interestingly, conditional knockout (cKO) of Ybx1 led to perinatal mortality in mice, along with abnormal cortical development. Cortical progenitor cells lacking Ybx1 exhibited impaired proliferation and differentiation. Multi-omics analysis identified the target mRNAs of Ybx1, which encode the key cell cycle regulatory proteins converging on cyclin D2 (Ccnd2). Ybx1 was found to regulate the stability of its target transcripts. Both knockdown and overexpression of Ybx1 targets via in utero electroporation confirmed that they mediated Ybx1 regulation of proliferation and differentiation of neural precursor cells. Further analysis showed that the G1 to S phase transition in cortical progenitor cells is delayed in the Ybx1 cKO. This study highlights the crucial function of the m5C reader protein Ybx1 in promoting cell cycle progression of the embryonic cortical progenitors, essential for proper cortical development.

Indexed as

Cell CycleCerebral CortexNeural Stem CellsNeurogenesisY-Box-Binding Protein 15-MethylcytosineAnimalsCell DifferentiationCell ProliferationFemaleGene Expression Regulation, DevelopmentalMiceMice, KnockoutTranscription Factors5-MethylcytosineTranscription FactorsY-Box-Binding Protein 1Ybx1 protein, mouse

Identifiers

PMID40435287
PMCPMC12148234

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.