Evidence map›Paper›PMID 40435239›Full record

ArticleScience advances2025

Dual mechanism of inflammation sensing by the hematopoietic progenitor genome.

Vu L Tran, Peng Liu, Koichi R Katsumura, Alexandra A Soukup, Audrey Kopp, Zamaan S Ahmad, Ashley E Mattina, Marjorie Brand, Kirby D Johnson, Emery H Bresnick

Abstract read
In one paragraph

Article in Science advances, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Vu L TranWisconsin Blood Cancer Research Institute, Department of Cell and Regenerative Biology, Carbone Cancer Center, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA.ORCID 0000-0001-5320-3280
Peng LiuDepartment of Biostatistics and Biomedical Informatics, Carbone Cancer Center, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA.ORCID 0000-0001-5655-2259
Koichi R KatsumuraWisconsin Blood Cancer Research Institute, Department of Cell and Regenerative Biology, Carbone Cancer Center, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA.ORCID 0000-0002-1523-0533
Alexandra A SoukupWisconsin Blood Cancer Research Institute, Department of Cell and Regenerative Biology, Carbone Cancer Center, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA.ORCID 0000-0002-4149-2393
Audrey KoppWisconsin Blood Cancer Research Institute, Department of Cell and Regenerative Biology, Carbone Cancer Center, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA.ORCID 0009-0005-5557-2473
Zamaan S AhmadWisconsin Blood Cancer Research Institute, Department of Cell and Regenerative Biology, Carbone Cancer Center, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA.ORCID 0009-0005-6707-8552
Ashley E MattinaWisconsin Blood Cancer Research Institute, Department of Cell and Regenerative Biology, Carbone Cancer Center, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA.ORCID 0009-0001-3889-0833
Marjorie BrandWisconsin Blood Cancer Research Institute, Department of Cell and Regenerative Biology, Carbone Cancer Center, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA.ORCID 0000-0001-8915-8012
Kirby D JohnsonWisconsin Blood Cancer Research Institute, Department of Cell and Regenerative Biology, Carbone Cancer Center, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA.ORCID 0000-0003-0236-7482
Emery H BresnickWisconsin Blood Cancer Research Institute, Department of Cell and Regenerative Biology, Carbone Cancer Center, University of Wisconsin School of Medicine and Public Health, Madison, WI, USA.ORCID 0000-0002-1151-5654

Funding

Hematopoietic Regulation via GATA SwitchesR01DK068634 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI Emery H. Bresnick · 2006 to 2026
$7.5M
NIDDK NIH HHS R01 DK068634
6 · The paper itself

Abstract

Genomes adapt dynamically to alterations in the signaling milieu, including inflammation that transiently or permanently disrupts genome function. Here, we elucidate how a progenitor cell genome senses and responds to inflammation when the developmental and transcriptional regulator GATA2 is limiting, which causes bone marrow failure in humans and mice and predisposes to leukemia in humans. GATA2

Indexed as

GenomeHematopoietic Stem CellsInflammationAnimalsChromatinCore Binding Factor Alpha 2 SubunitGATA2 Transcription FactorGene Expression RegulationHumansMiceProto-Oncogene ProteinsProto-Oncogene Protein Spi-1Trans-ActivatorsChromatinCore Binding Factor Alpha 2 SubunitGata2 protein, mouseGATA2 Transcription FactorProto-Oncogene ProteinsProto-Oncogene Protein Spi-1Runx1 protein, mouseTrans-Activators

Identifiers

PMID40435239
PMCPMC12118549

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.