Evidence map›Paper›PMID 40435237›Full record

ArticleScience advances2025

Deciphering linezolid-induced hematologic toxicity: Targeting TOP2A and TOP2B via its primary metabolite PNU142586.

Vo Thuy Anh Thu, Nguyen Quynh Nhu, Nguyen Thi Van Anh, So-An Lim, Hyeon-Jeong Seong, Jony Md Rasheduzzaman, Uijin Kim, Hyun-Soo Cho, Soedarsono Soedarsono, Jae-Gook Shin and 1 more

Abstract read
In one paragraph

Article in Science advances, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Vo Thuy Anh ThuCenter for Personalized Precision Medicine of Tuberculosis, Inje University College of Medicine, Busan, Korea.ORCID 0000-0003-4490-7520
Nguyen Quynh NhuCenter for Personalized Precision Medicine of Tuberculosis, Inje University College of Medicine, Busan, Korea.ORCID 0009-0002-7438-6463
Nguyen Thi Van AnhCenter for Personalized Precision Medicine of Tuberculosis, Inje University College of Medicine, Busan, Korea.ORCID 0000-0003-0752-6091.
So-An LimCenter for Personalized Precision Medicine of Tuberculosis, Inje University College of Medicine, Busan, Korea.ORCID 0009-0008-5267-1910
Hyeon-Jeong SeongCenter for Personalized Precision Medicine of Tuberculosis, Inje University College of Medicine, Busan, Korea.ORCID 0009-0003-0087-631X
Jony Md RasheduzzamanCenter for Personalized Precision Medicine of Tuberculosis, Inje University College of Medicine, Busan, Korea.ORCID 0000-0001-5656-9085
Uijin KimDepartment of Systems Biology, Yonsei University, Seoul 03722, Republic of Korea.
Hyun-Soo ChoDepartment of Systems Biology, Yonsei University, Seoul 03722, Republic of Korea.ORCID 0000-0003-4067-4715
Soedarsono SoedarsonoSub-pulmonology Department of Internal Medicine, Faculty of Medicine, Hang Tuah University, Surabaya, Indonesia.ORCID 0000-0001-7317-5619
Jae-Gook ShinCenter for Personalized Precision Medicine of Tuberculosis, Inje University College of Medicine, Busan, Korea.ORCID 0000-0002-5821-850X
Yong-Soon ChoCenter for Personalized Precision Medicine of Tuberculosis, Inje University College of Medicine, Busan, Korea.ORCID 0000-0003-1424-1123

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Linezolid, an oxazolidinone antibiotic, is widely used to treat multidrug-resistant tuberculosis and drug-resistant Gram-positive infections. However, prolonged use is associated with severe hematologic toxicity, the underlying mechanisms of which remain incompletely understood, particularly regarding the role of linezolid metabolites. Our clinical study indicates that elevated exposure to PNU142586, a primary metabolite of linezolid, is associated with an increased risk of linezolid-induced toxicity, even in the absence of renal impairment. To elucidate its mechanism, we identify DNA topoisomerase 2-α (TOP2A) and DNA topoisomerase 2-β (TOP2B) as primary targets of PNU142586 at molecular, cellular, and in vivo levels. PNU142586 disrupts replication and transcription by impeding DNA binding to TOP2A and TOP2B with a favorable conformation for cleavage and by inhibiting adenosine 5'-triphosphate hydrolysis, ultimately leading to antiproliferative and cytotoxic effects, including mitochondrial dysfunction. The present study thus provides mechanistic insight into linezolid-induced hematologic toxicity and offers a foundation for safer antibiotic development and improved clinical monitoring through biomarker identification.

Indexed as

DNA Topoisomerases, Type IIHematologic DiseasesLinezolidTopoisomerase II InhibitorsAnimalsAnti-Bacterial AgentsFemaleHumansMaleMicePoly-ADP-Ribose Binding ProteinsAnti-Bacterial AgentsDNA Topoisomerases, Type IILinezolidPoly-ADP-Ribose Binding ProteinsTOP2A protein, humanTOP2B protein, humanTopoisomerase II Inhibitors

Identifiers

PMID40435237
PMCPMC12118551

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.