Evidence map›Paper›PMID 40434531›Full record

ArticleInternational journal of computer assisted radiology and surgery2025

Homology-feature-assisted quantification of fibrotic lesions in computed tomography images: a proof of concept for CT image feature-based prediction for gene-expression-distribution.

Kentaro Doi, Hodaka Numasaki, Yusuke Anetai, Yayoi Natsume-Kitatani

Abstract read
In one paragraph

Article in International journal of computer assisted radiology and surgery, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Kentaro DoiNational Institutes of Biomedical Innovation, Health and Nutrition, Osaka, Japan. doi@nibn.go.jp.ORCID http://orcid.org/0000-0002-1525-9264
Hodaka NumasakiGraduate School of Medicine, The University of Osaka, Osaka, Japan.ORCID http://orcid.org/0000-0002-4427-4316
Yusuke AnetaiDepartment of Radiology, Kansai Medical University, Osaka, Japan.ORCID http://orcid.org/0000-0002-2284-7582
Yayoi Natsume-KitataniNational Institutes of Biomedical Innovation, Health and Nutrition, Osaka, Japan.ORCID http://orcid.org/0000-0003-1749-3318

Funding

Japan Society for the Promotion of Science 24K23909
6 · The paper itself

Abstract

purposeComputed tomography (CT) image is promising for diagnosing of interstitial idiopathic pneumonias (IIPs); however, quantification of IIPs lesions in CT images is required. This study aimed to quantitatively evaluate fibrotic lesions in CT images using homology-based image analysis.

methodsWe collected publicly available CT images comprising 47 fibrotic images and 36 non-fibrotic images. The homology-profile (HP) image analysis method provides b0 and b1 profiles, indicating the number of isolated components and holes in a binary image. We locally applied the HP method to the CT image and generated homology-based feature (HF) maps as resultant images. The collected images were randomly divided into the tuning dataset and the testing dataset. The cut-off value for classifying the HF map for fibrotic or non-fibrotic images was defined using receiver operating characteristic (ROC) analysis with the tuning dataset. This cut-off value was evaluated using the testing dataset with accuracy, sensitivity, specificity, and precision.

resultsWe successfully visualized the quantification of fibrotic lesions in the HF map. The b0 HF map was more suitable for quantifying fibrotic lesions than b1. The mean cut-off value of the b0 HF map was 199, with all performances achieved at 1.0. Furthermore, the classification of the b0 HF map for fibrotic or lung cancer images achieved all maximum performances at 1.0.

conclusionThis study demonstrated the feasibility of using the HF in quantitatively evaluating fibrotic lesions in CT images. Our proposed HP-based method can also be promising in quantifying the fibrotic lesions of patients with IIPs, which can be applicable to assist the diagnosis of IIPs.

Indexed as

Idiopathic Pulmonary FibrosisRadiographic Image Interpretation, Computer-AssistedTomography, X-Ray ComputedGene ExpressionHumansProof of Concept StudySensitivity and SpecificityComputer-aided diagnosisCT imageHomologyIdiopathic interstitial pneumoniasQuantitative image analysis

Identifiers

PMID40434531
PMCPMC12350597

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.