Evidence map›Paper›PMID 40434444›Full record

ArticleMikrochimica acta2025

Fluorescence origami paper-based analytical device based on strand displacement assay for SARS-CoV-2 cDNA detection.

Sarida Naorungroj, Ignasia Handipta Mahardika, Eunjin Huh, Jutiporn Yukird, Ekawat Pasomsub, Orawon Chailapakul, Kwanwoo Shin

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Article in Mikrochimica acta, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

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0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Sarida NaorungrojElectrochemistry and Optical Spectroscopy Center of Excellence (EOSCE), Department of Chemistry, Faculty of Science, Chulalongkorn University, Phayathai Road, Pathumwan, Bangkok, 10330, Thailand.
Ignasia Handipta MahardikaDepartment of Chemistry and Institute of Biological Interfaces, Sogang University, Seoul, 04107, Republic of Korea.
Eunjin HuhDepartment of Chemistry and Institute of Biological Interfaces, Sogang University, Seoul, 04107, Republic of Korea.
Jutiporn YukirdDepartment of Chemistry and Institute of Biological Interfaces, Sogang University, Seoul, 04107, Republic of Korea.
Ekawat PasomsubDepartment of Pathology, Faculty of Medicine Ramathibodi Hospital, Mahidol University, Bangkok, 10400, Thailand.
Orawon ChailapakulElectrochemistry and Optical Spectroscopy Center of Excellence (EOSCE), Department of Chemistry, Faculty of Science, Chulalongkorn University, Phayathai Road, Pathumwan, Bangkok, 10330, Thailand. orawon.c@chula.ac.th.
Kwanwoo ShinDepartment of Chemistry and Institute of Biological Interfaces, Sogang University, Seoul, 04107, Republic of Korea. kwshin@sogang.ac.kr.

Funding

Advanced Bio-Interface Core Research Facility by Ministry of Education, Korea. 2020R1A6C1020271Basic Research Program 2018R1A6A1A03024940Korea Environment Industry & Technology Institute through the program for the management of aquatic ecosystem health, funded by Korea Ministry of Environment 2020003030001
6 · The paper itself

Abstract

A fluorescence origami paper-based analytical device (Flu-oPAD) based on a strand displacement assay as a point-of-care testing (POCT) sensing platform for DNA detection is presented. This device facilitates multiple steps in a single device, including sample loading, incubation, and washing. The detection zone was immobilized with a 6-FAM-modified probe (F-probe), which formed a complex with a BHQ1-modified probe (Q-probe) to minimize background signals. In the presence of target DNA, hybridization with the F-probe releases the Q-probe, resulting in a fluorescence response proportional to the target DNA concentration. The sensor exhibits good selectivity for target DNA, with a linearity range from 0.1 nM to 10 μM and an experimental detection limit of 0.1 nM, completing all procedures within 15 min. The real-world applicability is demonstrated by successfully detecting complementary DNA (cDNA) from the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), a cause of the COVID-19 pandemic. This study further introduces a multi-array Flu-oPAD for simultaneous detection of SARS-CoV-2 ORF1ab, N, and E gene cDNAs. This multi-array Flu-oPAD is applied to nasopharyngeal swab samples, showing good agreement with the standard RT-PCR method. Overall, the developed Flu-oPAD has shown great potential as an effective POCT tool for DNA screening. It offers simplicity, portability, accessibility, and cost-effectiveness, offering its potential impact on addressing pressing healthcare needs.

Indexed as

COVID-19 Nucleic Acid TestingDNA, ComplementaryDNA, ViralPaperSARS-CoV-2COVID-19FluorescenceFluorescent DyesHumansLimit of DetectionNucleic Acid HybridizationPoint-of-Care TestingDNA, ComplementaryDNA, ViralFluorescent DyesFluorescence sensorMultiplex detectionSARS-CoV-2 cDNA detection

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.