Evidence map›Paper›PMID 40430972›Full record

ArticlePlants (Basel, Switzerland)2025

A Novel Approach for Comparing Selected Metabolites in Citrus Leaves and Fruits Across Datasets.

Ryan C Traband, Xuesong Wang, Mariano Resendiz, Megan Meng, Yoko Hiraoka, Qiong Jia, Rendell Chang, Ethan Eurmsirilerd, Tracy Kahn, Peggy A Mauk and 7 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Plants (Basel, Switzerland), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Ryan C TrabandDepartment of Botany and Plant Sciences, University of California, Riverside, CA 92521, USA.
Xuesong WangGenetics, Genomics, and Bioinformatics Program, University of California, Riverside, CA 92521, USA.
Mariano ResendizDepartment of Botany and Plant Sciences, University of California, Riverside, CA 92521, USA.
Megan MengDepartment of Botany and Plant Sciences, University of California, Riverside, CA 92521, USA.
Yoko HiraokaDepartment of Botany and Plant Sciences, University of California, Riverside, CA 92521, USA.
Qiong JiaGenetics, Genomics, and Bioinformatics Program, University of California, Riverside, CA 92521, USA.
Rendell ChangGenetics, Genomics, and Bioinformatics Program, University of California, Riverside, CA 92521, USA.ORCID 0009-0009-9326-1034
Ethan EurmsirilerdGenetics, Genomics, and Bioinformatics Program, University of California, Riverside, CA 92521, USA.
Tracy KahnDepartment of Botany and Plant Sciences, University of California, Riverside, CA 92521, USA.
Peggy A MaukDepartment of Botany and Plant Sciences, University of California, Riverside, CA 92521, USA.ORCID 0000-0003-2392-791X
Amancio De SouzaMetabolomics Core Facility, University of California, Riverside, CA 92521, USA.
Anil BhatiaMetabolomics Core Facility, University of California, Riverside, CA 92521, USA.
Haiyan KeMetabolomics Core Facility, University of California, Riverside, CA 92521, USA.
Donald MerhautDepartment of Botany and Plant Sciences, University of California, Riverside, CA 92521, USA.
Mikeal L RooseDepartment of Botany and Plant Sciences, University of California, Riverside, CA 92521, USA.ORCID 0000-0002-0663-3293
Zhenyu JiaDepartment of Botany and Plant Sciences, University of California, Riverside, CA 92521, USA.ORCID 0000-0002-1428-904X
John M ChaterDepartment of Horticultural Sciences, University of Florida, Lake Alfred, FL 33850, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Citrus fruits are valued not only for their nutritional benefits but also for their rich phytochemical content. Metabolomics has emerged as a comprehensive technique for assessing the chemical composition of fruits. The botanical connection between leaves, flowers, and fruits is reflected in both their structure and chemical composition, particularly in the flow of nutrients between plant organs. We introduced a new logarithm ratio-based approach to compare metabolite profiles between fruits and leaves. We hypothesize that this method allows for the analysis of multiple citrus metabolomic profiles to reveal known and novel correlation patterns, reflecting the dynamic connections between metabolic sources. To test this hypothesis, we leveraged comprehensive leaf metabolomic profiles from over 200 accessions in the Givaudan Citrus Variety Collection and reviewed published metabolomics data for fruits and juices of matching citrus types. By employing logarithm-transformed metabolic ratios within each dataset, we accounted for systematic differences across metabolomic platforms, achieving an unbiased analysis.

Indexed as

citruscomparisondatasetsmetabolomicsmethod

Identifiers

PMID40430972
PMCPMC12115042

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.