Evidence map›Paper›PMID 40429984›Full record

ReviewInternational journal of molecular sciences2025

DDM1 Maintains Heterochromatin by Regulating Histone Variants.

Yuanyi Sun, Qijun Xie, Huaixue Chu, Bin Lv, Linan Xie, Qingzhu Zhang

Abstract readReview
In one paragraph

Review in International journal of molecular sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yuanyi SunCollege of Life Science, Northeast Forestry University, Harbin 150040, China.
Qijun XieCollege of Life Science, Northeast Forestry University, Harbin 150040, China.
Huaixue ChuCollege of Life Science, Northeast Forestry University, Harbin 150040, China.
Bin LvCollege of Life Science, Northeast Forestry University, Harbin 150040, China.
Linan XieKey Laboratory of Sustainable Forest Ecosystem Management-Ministry of Education, School of Ecology, Northeast Forestry University, Harbin 150040, China.ORCID 0009-0000-7454-6936
Qingzhu ZhangKey Laboratory of Sustainable Forest Ecosystem Management-Ministry of Education, School of Ecology, Northeast Forestry University, Harbin 150040, China.ORCID 0000-0001-8246-6688

Funding

Funded Projects of the Innovation and Entrepreneurship Program for 2022 Undergraduates of Northeast Forestry University 202410225248Heilongjiang Provincial Natural Science Foundation of China LH2024C047the Fundamental Research Funds for the Central Universities 2572024DP24the National Key R&D Program of China during the 14th Five-year Plan Period 2021YFD2200103
6 · The paper itself

Abstract

Chromatin remodeling factors efficiently and precisely establish, maintain, regulate, and distinguish between chromatin states in eukaryotes. DECREASE in DNA METHYLATION 1 (DDM1) is an important heterochromatin remodeling factor in plants that is responsible for maintaining heterochromatin DNA methylation and suppressing most transposable elements. Previous studies have predominantly focused on the effects of DDM1 on chromatin, with only a few focusing on its remodeling mechanisms. However, recent studies have greatly advanced understanding of the remodeling functions of DDM1 and, in particular, have clarified the mechanisms involved. In this review, we discuss the newly identified remodeling functions and mechanisms of DDM1. As DDM1 is closely involved in histone variant exchange, we first introduce the main histone variants associated with chromatin states in plants. Next, we focus on how DDM1 promotes the deposition of specific histone variants and describe its other remodeling functions. We propose that the core function of DDM1 is the regulation of histone variant distribution. DDM1 maintains heterochromatin by regulating the deposition of H2A and H3 variants, particularly by facilitating the exchange of specific histone variants.

Indexed as

DNA-Binding ProteinsHeterochromatinHistonesChromatin Assembly and DisassemblyDNA MethylationHumansDNA-Binding ProteinsHeterochromatinHistoneschromatin remodeling factorsDDM1heterochromatin maintenancehistone variant exchangehistone variantsTE silencing

Identifiers

PMID40429984
PMCPMC12112423

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.