Evidence map›Paper›PMID 40427243›Full record

ArticleAnimals : an open access journal from MDPI2025

Identification of Resistance Loci to Avian Leukosis via Genome-Wide Association Analysis in Chengkou Mountain Chickens.

Yuhang Li, Min Tan, Guang Yang, Qinwen Xu, Qigui Wang, Haiwei Wang, Xi Lan

Abstract read
In one paragraph

Article in Animals : an open access journal from MDPI, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yuhang LiCollege of Animal Science, Southwest University, Chongqing 400715, China.
Min TanCollege of Animal Science, Southwest University, Chongqing 400715, China.ORCID 0009-0005-4529-0026
Guang YangCollege of Animal Science, Southwest University, Chongqing 400715, China.ORCID 0000-0003-4879-1991
Qinwen XuCollege of Animal Science, Southwest University, Chongqing 400715, China.
Qigui WangChongqing Academy of Animal Sciences, Chongqing 402460, China.
Haiwei WangChongqing Academy of Animal Sciences, Chongqing 402460, China.
Xi LanCollege of Animal Science, Southwest University, Chongqing 400715, China.ORCID 0009-0000-1203-2059

Funding

Breeding of New Breeds (Synthetic Line) of High-Quality Chickens for Both Meat and Eggs cstc2021 jscx-gksbX0004Chongqing Science and Enterprise Consortium Germplasm Resources Collection and Utilization and Variety Trial KQ202301The Fundamental Research Funds for the Central Universities XDJK2020C018The National Natural Science Foundation of China 31802054The Project of Chongqing Agricultural Science Innovation NW202209
6 · The paper itself

Abstract

Avian leukosis (AL), a major vertically transmitted infectious disease, poses a significant challenge to the conservation and industrial development of indigenous chicken breeds in China. In this study, Chengkou mountain chickens were used as a model to systematically identify genetic markers associated with resistance to avian leukosis virus subgroup J (ALV-J) through a genome-wide association study (GWAS). Genomic DNA was extracted from 500 hens at 300 days of age, and cloacal swabs, plasma, and egg white samples were collected to assess the ALV-J infection status. A total of 325 ALV-positive (ALV+) and 175 ALV-negative (ALV-) individuals were identified. Based on 10× whole-genome resequencing and stringent quality control, 12,644,463 high-quality SNPs were obtained. GWAS revealed a significant enrichment of SNPs on chromosome 6 (Chr6), from which 218 SNPs significantly associated with ALV-J resistance and 49 candidate genes were identified. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses showed that many of these genes, including

Indexed as

ALVChengkou mountain chickenGWASresistance locitumorigenesis

Identifiers

PMID40427243
PMCPMC12108354

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.