Evidence map›Paper›PMID 40427097›Full record

ArticleCancers2025

Deep Learning for Automated Ventricle and Periventricular Space Segmentation on CT and T1CE MRI in Neuro-Oncology Patients.

Mart Wubbels, Marvin Ribeiro, Jelmer M Wolterink, Wouter van Elmpt, Inge Compter, David Hofstede, Nikolina E Birimac, Femke Vaassen, Kati Palmgren, Hendrik H G Hansen and 5 more

Abstract read
In one paragraph

Article in Cancers, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Mart WubbelsDepartment of Radiation Oncology (Maastro), GROW Research Institute for Oncology and Reproduction, Maastricht University Medical Centre+, 6229 ET Maastricht, The Netherlands.
Marvin RibeiroDepartment of Radiation Oncology (Maastro), GROW Research Institute for Oncology and Reproduction, Maastricht University Medical Centre+, 6229 ET Maastricht, The Netherlands.
Jelmer M WolterinkDepartment of Applied Mathematics, Technical Medical Centre, University of Twente, 7522 NB Enschede, The Netherlands.
Wouter van ElmptDepartment of Radiation Oncology (Maastro), GROW Research Institute for Oncology and Reproduction, Maastricht University Medical Centre+, 6229 ET Maastricht, The Netherlands.
Inge CompterDepartment of Radiation Oncology (Maastro), GROW Research Institute for Oncology and Reproduction, Maastricht University Medical Centre+, 6229 ET Maastricht, The Netherlands.ORCID 0000-0002-6155-1565
David HofstedeDepartment of Radiation Oncology (Maastro), GROW Research Institute for Oncology and Reproduction, Maastricht University Medical Centre+, 6229 ET Maastricht, The Netherlands.
Nikolina E BirimacDepartment of Radiation Oncology (Maastro), GROW Research Institute for Oncology and Reproduction, Maastricht University Medical Centre+, 6229 ET Maastricht, The Netherlands.
Femke VaassenDepartment of Radiation Oncology (Maastro), GROW Research Institute for Oncology and Reproduction, Maastricht University Medical Centre+, 6229 ET Maastricht, The Netherlands.
Kati PalmgrenDepartment of Radiation Oncology (Maastro), GROW Research Institute for Oncology and Reproduction, Maastricht University Medical Centre+, 6229 ET Maastricht, The Netherlands.
Hendrik H G HansenDepartment of Radiation Oncology (Maastro), GROW Research Institute for Oncology and Reproduction, Maastricht University Medical Centre+, 6229 ET Maastricht, The Netherlands.ORCID 0000-0001-5860-8981
Hiska L van der WeideDepartment of Radiation Oncology, University Medical Center Groningen, University of Groningen, 9713 AP Groningen, The Netherlands.ORCID 0000-0001-6734-2345
Charlotte L BrouwerDepartment of Radiation Oncology, University Medical Center Groningen, University of Groningen, 9713 AP Groningen, The Netherlands.ORCID 0000-0002-2349-7369
Miranda C A KramerDepartment of Radiation Oncology, University Medical Center Groningen, University of Groningen, 9713 AP Groningen, The Netherlands.ORCID 0009-0003-5040-998X
Daniëlle B P EekersDepartment of Radiation Oncology (Maastro), GROW Research Institute for Oncology and Reproduction, Maastricht University Medical Centre+, 6229 ET Maastricht, The Netherlands.ORCID 0000-0003-1917-6279
Catharina M L ZegersDepartment of Radiation Oncology (Maastro), GROW Research Institute for Oncology and Reproduction, Maastricht University Medical Centre+, 6229 ET Maastricht, The Netherlands.

Funding

Netherlands Organisation for Health Research and Development 10070012010002
6 · The paper itself

Abstract

purposeThis study aims to create a deep learning (DL) model capable of accurately delineating the ventricles, and by extension, the periventricular space (PVS), following the 2021 EPTN Neuro-Oncology Atlas guidelines on T1-weighted contrast-enhanced MRI scans (T1CE). The performance of this DL model was quantitatively and qualitatively compared with an off-the-shelf model. MATERIALS AND

methodsAn nnU-Net was trained for ventricle segmentation using both CT and T1CE MRI images from 78 patients. Its performance was compared to that of a publicly available pretrained segmentation model, SynthSeg. The evaluation was conducted on both internal (N = 18) and external (n = 18) test sets, with each consisting of paired CT and T1CE MRI images and expert-delineated ground truths (GTs). Segmentation accuracy was assessed using the volumetric Dice Similarity Coefficient (DSC), 95th percentile Hausdorff distance (HD95), surface DSC, and added path length (APL). Additionally, a local evaluation of ventricle segmentations quantified differences between manual and automatic segmentations across both test sets. All segmentations were scored by radiotherapy technicians for clinical acceptability using a 4-point Likert scale.

resultsThe nnU-Net significantly outperformed the SynthSeg model on the internal test dataset in terms of median [range] DSC, 0.93 [0.86-0.95] vs. 0.85 [0.67-0.91], HD95, 0.9 [0.7-2.5] mm vs. 2.2 [1.7-4.8] mm, surface DSC, 0.97 [0.90-0.98] vs. 0.84 [0.70-0.89], and APL, 876 [407-1298] mm vs. 2809 [2311-3622] mm, all with

conclusionsThe nnU-Net model outperformed the SynthSeg model on the internal dataset in both segmentation metrics and clinician ratings. While segmentation metrics showed no significant differences between the models on the external set, clinician ratings favored nnU-Net, suggesting enhanced clinical acceptability. This suggests that nnU-Net could contribute to more time-efficient and streamlined radiotherapy planning workflows.

Indexed as

autocontouringdeep learningneuro-oncologynnUNetperiventricular spaceventricles

Identifiers

PMID40427097
PMCPMC12110295

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.