Evidence map›Paper›PMID 40425586›Full record

ArticleNature communications2025

Surveillance of avian influenza through bird guano in remote regions of the global south to uncover transmission dynamics.

Dhammika Leshan Wannigama, Mohan Amarasiri, Phatthranit Phattharapornjaroen, Cameron Hurst, Charin Modchang, John Jefferson V Besa, Kazuhiko Miyanaga, Longzhu Cui, Stefan Fernandez, Angkana T Huang and 34 more

Erratum issuedAbstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Review
  3. A Genomic Catalog of Migratory Microbiomes from Wild Birds across China's Habitats.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  4. Article
  5. Review
  6. Review
  7. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

44 authors.

Dhammika Leshan WannigamaDepartment of Infectious Diseases, Faculty of Medicine, Yamagata University, Yamagata, Japan. leshanwannigama@med.id.yamagata-u.ac.jp.ORCID http://orcid.org/0000-0001-6316-1221
Mohan Amarasiri *Pathogen Hunter's Research Collaborative Team, Department of Infectious Diseases and Infection Control, Yamagata Prefectural Central Hospital, Yamagata, Japan.
Phatthranit Phattharapornjaroen *Pathogen Hunter's Research Collaborative Team, Department of Infectious Diseases and Infection Control, Yamagata Prefectural Central Hospital, Yamagata, Japan.
Cameron Hurst *Pathogen Hunter's Research Collaborative Team, Department of Infectious Diseases and Infection Control, Yamagata Prefectural Central Hospital, Yamagata, Japan.
Charin ModchangBiophysics Group, Department of Physics, Faculty of Science, Mahidol University, Bangkok, Thailand.ORCID http://orcid.org/0000-0002-0739-006X
John Jefferson V BesaDepartment of Infectious Diseases and Infection Control, Yamagata Prefectural Central Hospital, Yamagata, Japan.
Kazuhiko MiyanagaDivision of Bacteriology, School of Medicine, Jichi Medical University, Tochigi, Japan.
Longzhu CuiDivision of Bacteriology, School of Medicine, Jichi Medical University, Tochigi, Japan.ORCID http://orcid.org/0000-0002-8909-3885
Stefan FernandezDepartment of Virology, U.S. Army Medical Directorate, Armed Forces Research Institute of Medical Sciences, Bangkok, Thailand.
Angkana T HuangDepartment of Genetics, University of Cambridge, Cambridge, UK.
Puey OunjaiDepartment of Biology, Faculty of Science, Mahidol University, Bangkok, Thailand.
W K C P WerawatteFaculty of Medicine, Wayamba University of Sri Lanka, and Teaching Hospital Kuliyapitiya, Kuliyapitiya, Sri Lanka.
Ali Hosseini Rad S MKite Pharma Inc., Santa Monica, CA, USA.
Porames VatanaprasanFaculty of Medicine Ramathibodi Hospital, Mahidol University, Bangkok, Thailand.
Dylan John JayPathogen Hunter's Research Collaborative Team, Department of Infectious Diseases and Infection Control, Yamagata Prefectural Central Hospital, Yamagata, Japan.
Thammakorn SaethangDepartment of Computer Science, Faculty of Science, Kasetsart University, Bangkok, Thailand.
Sirirat Luk-InDepartment of Clinical Microbiology and Applied Technology, Faculty of Medical Technology, Mahidol University, Bangkok, Thailand.
Phitsanuruk KanthaweePublic Health major, School of Health Science, Mae Fah Luang University, Chiang Rai, Thailand.
Wanwara ThuptimdangInstitute of Biomedical Engineering, Department of Biomedical Sciences and Biomedical Engineering, Faculty of Medicine, Prince of Songkla University, Hat Yai, Songkhla, Thailand.
Ratana TacharoenmuangNational Institute of Health, Department of Medical Sciences, Nonthaburi, Thailand.
Bernadina CynthiaDepartment of General Medicine, St. Carolus Hospital, Jakarta, Indonesia.
S P H Spencer VitharanaThe Lygodium Ceylon Health and Environmental Policy Research Center, Colombo, Sri Lanka.ORCID http://orcid.org/0009-0005-9424-451X
Natharin NgamwongsatitDepartment of Clinical Sciences and Public Health, Faculty of Veterinary Science, Mahidol University, Nakhon Pathom, Thailand.
Hitoshi IshikawaYamagata Prefectural University of Health Sciences, Kamiyanagi, Yamagata, Japan.
Takashi FurukawaLaboratory of Environmental Hygiene, Department of Health Science, School of Allied Health Sciences, Kitasato University, Kitasato, Sagamihara-Minami, Kanagawa, Japan.
Yangzhong WangDivision of Respiratory and Critical Care Medicine, Affiliated Fuling hospital of Chongqing University, Chongqing, China.
Andrew C SingerUK Centre for Ecology & Hydrology, Wallingford, UK.ORCID http://orcid.org/0000-0003-4705-6063
Naveen Kumar Devanga RagupathiBiofilms and Antimicrobial Resistance Consortium of ODA receiving countries, The University of Sheffield, Sheffield, UK.
Tanittha ChatsuwanDepartment of Microbiology, Faculty of Medicine, Chulalongkorn University, King Chulalongkorn Memorial Hospital, Thai Red Cross Society, Bangkok, Thailand.
Kazunari SeiLaboratory of Environmental Hygiene, Department of Health Science, School of Allied Health Sciences, Kitasato University, Kitasato, Sagamihara-Minami, Kanagawa, Japan.ORCID http://orcid.org/0000-0002-0684-6002
Asuka NanboThe National Research Center for the Control and Prevention of Infectious Diseases, Nagasaki University, Nagasaki, Japan.ORCID http://orcid.org/0000-0001-8764-1350
Asada LeelahavanichkulDepartment of Microbiology, Faculty of Medicine, Chulalongkorn University, King Chulalongkorn Memorial Hospital, Thai Red Cross Society, Bangkok, Thailand.
Talerngsak KanjanabuchDivision of Nephrology, Department of Medicine, Faculty of Medicine, Chulalongkorn University, Bangkok, Thailand.
Hiroshi HamamotoDepartment of Infectious Diseases, Faculty of Medicine, Yamagata University, Yamagata, Japan.ORCID http://orcid.org/0000-0001-9315-7442
Paul G HigginsInstitute for Medical Microbiology, Immunology and Hygiene, Faculty of Medicine and University Hospital Cologne, University of Cologne, Cologne, Germany.ORCID http://orcid.org/0000-0001-8677-9454
Daisuke SanoDepartment of Civil and Environmental Engineering, Graduate School of Engineering, Tohoku University, Sendai, Miyagi, Japan.ORCID http://orcid.org/0000-0001-8075-6972
Anthony KicicWal-Yan Respiratory Research Centre, Telethon Kids Institute, University of Western Australia, Nedlands, WA, Australia.ORCID http://orcid.org/0000-0002-0008-9733
José O ValdebenitoDepartamento de Zoología, Universidad de Concepción, Concepción, Chile.
Jonas BonnedahlDepartment of Infectious Diseases in Kalmar, Region Kalmar County, and Department of Biomedical and Clinical Sciences, Linköping University, Linköping, Sweden.
Sam TrowsdaleSchool of Environment, University of Auckland, Auckland, New Zealand.
Parichart Hongsing *Department of Infectious Diseases, Faculty of Medicine, Yamagata University, Yamagata, Japan.
Aisha KhatibDepartment of Family & Community Medicine, University of Toronto, Toronto, ON, Canada.
Kenji ShibuyaTokyo Foundation for Policy Research, Minato-ku, Tokyo, Japan.ORCID http://orcid.org/0000-0003-2528-7530
Shuichi AbeDepartment of Infectious Diseases, Faculty of Medicine, Yamagata University, Yamagata, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Avian influenza viruses (AIVs) pose a growing global health threat, particularly in low- and middle-income countries (LMICs), where limited surveillance capacity and under-resourced healthcare systems hinder timely detection and response. Migratory birds play a significant role in the transboundary spread of AIVs, yet data from key regions along migratory flyways remain sparse. To address these surveillance gaps, we conducted a study between December 2021 and February 2023 using fresh bird guano collected across 10 countries in the Global South. Here, we show that remote, uninhabited regions in previously unsampled areas harbor a high diversity of AIV strains, with H5N1 emerging as the most prevalent. Some of these H5N1 samples also carry mutations that may make them less responsive to the antiviral drug oseltamivir. Our findings documented the presence of AIVs in several underrepresented regions and highlighted critical transmission hotspots where viral evolution may be accelerating. These results underscore the urgent need for geographically targeted surveillance to detect emerging variants, inform public health interventions, and reduce the risk of zoonotic spillover.

Indexed as

BirdsInfluenza A Virus, H5N1 SubtypeInfluenza in BirdsAnimal MigrationAnimalsAntiviral AgentsEpidemiological MonitoringGlobal HealthHumansOseltamivirPhylogenyAntiviral AgentsOseltamivir

Identifiers

PMID40425586
PMCPMC12116859

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.