Evidence map›Paper›PMID 40425396›Full record

ArticleTrends in microbiology2025

Unlocking antimicrobial resistance with multiomics and machine learning.

Abhirupa Ghosh, Charmie K Vang, Evan P Brenner, Janani Ravi

Abstract read
In one paragraph

Article in Trends in microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. bioRxiv : the preprint server for biology · 2026
    Article
  4. Comparative Biofilmomics of Antimicrobial-ResistantAnimals : an open access journal from MDPI · 2026
    Review
  5. Genotype-phenotype modeling of light ecotypes inbioRxiv : the preprint server for biology · 2026
    Article
  6. Review
  7. Review
  8. Frontiers in bioinformatics · 2026
    Review
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Abhirupa GhoshDepartment of Biomedical Informatics, University of Colorado, Anschutz Medical Campus, Aurora, CO 80045, USA.
Charmie K VangDepartment of Biomedical Informatics, University of Colorado, Anschutz Medical Campus, Aurora, CO 80045, USA.
Evan P BrennerDepartment of Biomedical Informatics, University of Colorado, Anschutz Medical Campus, Aurora, CO 80045, USA.
Janani RaviDepartment of Biomedical Informatics, University of Colorado, Anschutz Medical Campus, Aurora, CO 80045, USA. Electronic address: janani.ravi@cuanschutz.edu.

Funding

Leveraging evolutionary analyses and machine learning to discover multiscale molecular features associated with antibiotic resistanceU01AI176414 · NIAID · UNIVERSITY OF COLORADO DENVER · PI RAVI, JANANI · 2023 to 2025
$1.4M
NIAID NIH HHS U01 AI176414
6 · The paper itself

Abstract

The global antimicrobial resistance (AMR) emergency is driven by complex and evolving molecular mechanisms. Cutting-edge machine learning methods and multiomics technologies can help to combat this crisis by predicting novel AMR biomarkers and outcomes with unprecedented precision and speed, offering critical insights into the molecular underpinnings of AMR.

Indexed as

Anti-Bacterial AgentsBacteriaDrug Resistance, BacterialGenomicsMachine LearningHumansMultiomicsAnti-Bacterial Agentsantimicrobial resistancedeep learningmachine learningmultiomics

Identifiers

PMID40425396
PMCPMC12226009

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.