Evidence map›Paper›PMID 40419674›Full record

ArticleVirchows Archiv : an international journal of pathology2025

Glycoprotein nonmetastatic melanoma protein b immunohistochemistry can be a useful ancillary tool to diagnose subependymal giant cell astrocytoma.

Marián Švajdler, Marek Brousil, Jiří Soukup, David Netuka, Petra Kašparová, Boris Rychlý, Tomáš Jirásek, Michal Hendrych, Mihaela Farcas, Kristýna Pivovarčíková and 3 more

Abstract read
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In one paragraph

Article in Virchows Archiv : an international journal of pathology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Marián ŠvajdlerŠikl's Department of Pathology, Faculty of Medicineand, Faculty of Medicine and University Hospital in Pilsen, Charles University, Alej Svobody 80, Pilsen, 323 00, Czech Republic. svajdler@biopticka.cz.ORCID http://orcid.org/0000-0001-8052-4741
Marek BrousilŠikl's Department of Pathology, Faculty of Medicineand, Faculty of Medicine and University Hospital in Pilsen, Charles University, Alej Svobody 80, Pilsen, 323 00, Czech Republic.
Jiří SoukupDepartment of Pathology, Military University Hospital, Prague, Czech Republic.
David NetukaDepartment of Neurosurgery and Neurooncology, First Faculty of Medicine, Charles University and Military University Hospital, Prague, Czech Republic.
Petra KašparováThe Fingerland Department of Pathology, Charles University, Faculty of Medicine in Hradec Králové and University Hospital, Hradec Kralove, Czech Republic.
Boris RychlýDiagnostic Pathology Centre, Unilabs Slovakia Ltd., Bratislava, Slovakia.
Tomáš JirásekDepartment of Pathology, Center PATOS Regional Hospital Liberec, Liberec, Czech Republic.
Michal HendrychFirst Department of Pathology, Faculty of Medicine, Masaryk University and St. Anne's University Hospital Brno, Brno, Czech Republic.
Mihaela FarcasOnco Team Diagnostic, Bucharest, Romania.
Kristýna PivovarčíkováŠikl's Department of Pathology, Faculty of Medicineand, Faculty of Medicine and University Hospital in Pilsen, Charles University, Alej Svobody 80, Pilsen, 323 00, Czech Republic.
Tomáš VaněčekŠikl's Department of Pathology, Faculty of Medicineand, Faculty of Medicine and University Hospital in Pilsen, Charles University, Alej Svobody 80, Pilsen, 323 00, Czech Republic.
Petr MartínekŠikl's Department of Pathology, Faculty of Medicineand, Faculty of Medicine and University Hospital in Pilsen, Charles University, Alej Svobody 80, Pilsen, 323 00, Czech Republic.
Roman MezencevSchool of Biological Sciences, Georgia Institute of Technology, Atlanta, GA, USA.

Funding

Charles University Cooperatio Program, research area DIAG, and by the European Regional Development Fund BBMRI_CZ LM2023033Charles University Cooperatio Program, research area DIAG, and by the European Regional Development Fund EF16_013/0001674Ministry of Defense of the Czech Republic Project MO1012
6 · The paper itself

Abstract

Subependymal giant cell astrocytoma (SEGA) is a World Health Organization Central Nervous System grade 1 tumor, strongly associated with tuberous sclerosis complex (TSC). Recent research indicates that Glycoprotein Nonmetastatic Melanoma Protein B (GPNMB), regulated by microphthalmia (MiT) family transcription factors may also be modulated by loss-of-function mutations in TSC1/2. We evaluated GPNMB as a diagnostic marker of subependymal giant cell astrocytoma (SEGA). A total of 11 patients with SEGA were included in the study. The control group comprised 185 primary central nervous system tumors, including high-grade and low-grade gliomas and glioneuronal/neuronal tumors. Strong and diffuse (≥ 50% of tumor cells) GPNMB expression was present in all SEGAs. In contrast, TTF-1 expression was detected in nine SEGAs, resulting in a sensitivity of 81.8%. Among the control group, 77 cases (41.6%) were negative for GPNMB and 102 (55.1%) cases were scored as > 1% < 50% positive. Only six control tissues (3.2%) showed diffuse and strong GPNMB expression. Among the tumors with strong GPNMB expression, there were three glioblastomas (GBMs) with morphology potentially mimicking SEGA but lacking TSC1, TSC2, or MTOR mutations. Using a cutoff of diffuse (≥ 50%) and strong positivity, GPNMB demonstrated 100% sensitivity (95% confidence interval: 74.1%-100%) and 96.8% specificity (95% confidence interval: 93.1%-98.5%) for diagnosing SEGA.

Indexed as

GPNMBImmunohistochemistrySubependymal giant cell astrocytomaTSC1/2Tuberous sclerosis

Identifiers

PMID40419674

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.