Evidence map›Paper›PMID 40419571›Full record

ArticleScientific reports2025

Characterization of the complete mitochondrial genome of Monticola rufiventris and phylogenetic implications.

Rui Hou, Quanfu Zhang, Mingna Duan, Shaobo Tang, Shuang Liu, Dandan Jiang, Chunhong Du, Xing Yang

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Characterization of the complete mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2026
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Rui Hou *Integrated Laboratory of Pathogenic Biology, College of Preclinical Medicine, Dali University, Dali, 671000, Yunnan, China.
Quanfu Zhang *Department of Gastroenterology, Clinical Medical College and the First Affiliated Hospital of Chengdu Medical College, Chengdu, 610000, Sichuan, China.
Mingna DuanIntegrated Laboratory of Pathogenic Biology, College of Preclinical Medicine, Dali University, Dali, 671000, Yunnan, China.
Shaobo TangIntegrated Laboratory of Pathogenic Biology, College of Preclinical Medicine, Dali University, Dali, 671000, Yunnan, China.
Shuang LiuIntegrated Laboratory of Pathogenic Biology, College of Preclinical Medicine, Dali University, Dali, 671000, Yunnan, China.
Dandan JiangSchool of Public Health, Dali University, Dali, 671000, Yunnan, China.
Chunhong DuYunan Institute of Eudemic Diseases Control and Prevention, Provincial Key Laboratory of Natural Epidemic Disease Prevention and Control Technology, Dali, Yunnan, People's Republic of China. dch6890728@163.com.
Xing YangIntegrated Laboratory of Pathogenic Biology, College of Preclinical Medicine, Dali University, Dali, 671000, Yunnan, China. yang08220013@163.com.

Funding

the Natural Science Foundation of China U2002219the Special Basic Cooperative Research Programs of Yunnan Provincial Undergraduate Universities' Association grant NO.202301BA070001-045Yunnan Fundamental Research Projects grant NO. 202401AT070084
6 · The paper itself

Abstract

Monticola rufiventris belongs to the order Passeriformes and the family Muscicapidae. As the largest group of birds, the phylogenetic relationships within Passeriformes have been a hot topic of research; however, studies on the genus Monticola within Passeriformes are relatively limited. This study presents the first comprehensive sequencing and analysis of the mitochondrial genome of M. rufiventris. Using Illumina Novaseq 6000 for paired-end sequencing, the results show that the mitochondrial genome of M. rufiventris is 16,803 bp, containing 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and 1 control region. Its structure is similar to that of known members of the Muscicapidae family, but there are some differences in gene size. Based on these data, we conducted mitochondrial assembly, selective pressure analysis, relative synonymous codon usage (RSCU) analysis, structural prediction of the 22 tRNAs, and phylogenetic tree construction. This study adds new data to the avian mitochondrial genome database, enhances the understanding of the Monticola mitochondrial genome, and provides valuable information for future research in avian taxonomy and phylogenetics.

Indexed as

Genome, MitochondrialPasseriformesPhylogenyAnimalsCodon UsageRNA, RibosomalRNA, TransferRNA, RibosomalRNA, TransferMitogenomeMonticola rufiventrisMuscicapidaePhylogeny

Identifiers

PMID40419571
PMCPMC12106822

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