Evidence map›Paper›PMID 40418286›Full record

ArticlePlant molecular biology2025

Comparative proteomic analysis of desiccation responses in recalcitrant Quercus acutissima seeds.

Haiyan Chen, Yongbao Shen

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Plant molecular biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Haiyan ChenCollege of Forestry, Nanjing Forestry University, 159 Longpan Road, Xuanwu District, Nanjing, 210037, China.
Yongbao ShenCollege of Forestry, Nanjing Forestry University, 159 Longpan Road, Xuanwu District, Nanjing, 210037, China. ybshen@njfu.edu.cn.ORCID http://orcid.org/0000-0002-0440-5086

Funding

Innovation and popularization of forest technology in Jiangsu Province, long-term scientific research base for the in vitro conservation of ray native tree germplasm resources in Jiangsu Province LYKJ [2001] 03Key R&D Program of Shandong Province "Accurate identification and innovative utilization of germplasm resources of Quercus acutissima and Catalpa bungei 2024LZGC00301Post-graduate Research &Practice Innovation Program of Jiangsu Province KYCX23_1219
6 · The paper itself

Abstract

The preservation of recalcitrant seeds is crucial for sustainable forest management and biodiversity conservation, particularly for economically important species like Quercus acutissima. However, these seeds pose serious challenges for ex situ conservation due to their high sensitivity to desiccation. This study employed integrated physiological, cytological, and proteomic approaches to systematically reveal the characteristics of viability loss during desiccation of Q. acutissima seeds. The results showed that fresh seeds had an initial moisture content of 38.8% (IM) with a germination percentage of 99%, while the semi-lethal (SLM) and lethal moisture (LM) contents were 26.8% and 14.8%, respectively. Desiccation caused cell wall collapse, membrane system rupture, and cytoplasmic degradation, while physiological and proteomic results revealed distinct responses during different desiccation stages. In the early stages, downregulation of iron superoxide dismutase indicated antioxidant system impairment, while lipoxygenase-mediated membrane lipid peroxidation triggered reactive oxygen species and malondialdehyde accumulation. During the deep desiccation stages (LM), we observed active energy metabolism with isocitrate dehydrogenase [NADP] upregulation. Additionally, the downregulation of phospholipase D and acyl-CoA synthetase may promote abnormal accumulation of free fatty acids; these factors collectively exacerbated membrane system disintegration. Furthermore, the glutathione-ascorbic acid cycle failed at later stages, translation mechanisms were imbalanced (ribosomal protein upregulation and tRNA synthetase downregulation), programmed cell death -related proteins were upregulated, while protective protein systems (insufficient late embryogenesis abundant expression and delayed small heat shock protein response) failed to effectively mitigate damage. The results suggest that the desiccation sensitivity of Q. acutissima seeds stems from a multi-cascade reaction involving oxidative damage, membrane system collapse, translation dysregulation, and programmed cell death. This study provides a theoretical basis for optimizing recalcitrant seed preservation strategies: comprehensive approaches should include antioxidant protection, membrane stabilization techniques, and metabolic regulation to holistically address multi-system damage during desiccation.

Indexed as

DesiccationPlant ProteinsProteomeProteomicsQuercusSeedsGene Expression Regulation, PlantGerminationReactive Oxygen SpeciesPlant ProteinsProteomeReactive Oxygen Species

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.