Evidence map›Paper›PMID 40418259›Full record

ArticleCurrent microbiology2025

EPS-Producing Bacteria Promote Aggregation in Soil Preventing the Leaching Loss of Nutrient.

Kapudeep Karmakar, Dipankar Roy, Srija Pal, Bratati Chowdhury, Ashok Choudhury

Abstract read
PubMed Publisher
In one paragraph

Article in Current microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Principles for Rigorous Design and Application of Synthetic Microbial Communities.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Pooled it
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Kapudeep Karmakar *Regional Research Station, Terai Zone, Uttar Banga Krishi Viswavidyalaya, Pundibari, Coochbehar, West Bengal, 736165, India. kapudeep@ubkv.ac.in.ORCID http://orcid.org/0000-0001-5336-7314
Dipankar Roy *Department of Soil Science and Agricultural Chemistry, Uttar Banga Krishi Viswavidyalaya, Pundibari, Coochbehar, West Bengal, 736165, India.
Srija Pal *Department of Soil Science and Agricultural Chemistry, Uttar Banga Krishi Viswavidyalaya, Pundibari, Coochbehar, West Bengal, 736165, India.
Bratati ChowdhurySoil and Water Conservation Engineering, Faculty of Technology, Uttar Banga Krishi Viswavidyalaya, Pundibari, Coochbehar, West Bengal, 736165, India.
Ashok ChoudhuryRegional Research Station, Terai Zone, Uttar Banga Krishi Viswavidyalaya, Pundibari, Coochbehar, West Bengal, 736165, India.

Funding

Regional Research Station Terai Zone RRSTZ/Rabi/23-24/05
6 · The paper itself

Abstract

Leaching loss of nutrients from the agricultural field is a major concern in areas receiving excessive rainfall. The water-soluble nutrients are therefore lost due to leaching and runoff water. This leads to excessive dependence on chemical fertilizers. In this regard, the role of indigenous exopolysaccharide (EPS) producing bacteria in stabilizing the nutrient-holding capacity is far greater than conceived. The sub-Himalayan terai region, located at Cwa zone (monsoon type with dry winter, Köppen's classification) in India, which receives heavy rainfall (> 3000 mm), is a suitable location to study the role of such bacteria. A culture-dependent analysis of EPS-producing bacteria showed their comparatively lower abundance throughout the year. The EPS-associated bacterial microenvironment on vermiculite particles under aerobic and anaerobic conditions was visualized using a Confocal Laser Scanning Microscope (CLSM). The cells of EPS producers were found distributed within the EPS matrix, pushing each other away, showing a higher organic matter secretion (EPS) per unit of the bacterial cells. Since EPS has adhesive properties, the indigenous EPS-producing bacteria were amended to the soil, and the formation of macroaggregates was analyzed. Two in-house EPS-producing bacteria were used to monitor if they can reduce the leaching loss of nutrients. In vitro, assays on nutrient-holding capacity by soil-column-flow-through revealed that these bacteria-treated soil retained more nutrients. Till now, there were no reports on the role of the genus Serratia in improving the nutrient-holding capacity. For the first time, we have shown that using such soil-dwelling genera can improve the formation of stable aggregates and prevent nutrient loss.

Indexed as

BacteriaNutrientsPolysaccharides, BacterialSoilSoil MicrobiologyFertilizersIndiaFertilizersNutrientsPolysaccharides, BacterialSoil

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.