Evidence map›Paper›PMID 40415572›Full record

ArticleThe New phytologist2025

Solanoeclepin C, a root-secreted molecule converted by rhizosphere microbes to hatching factors for potato cyst nematodes.

Ryota Akiyama, Yui Kawano, Kosuke Shimizu, Soichiro Makino, Karen Akanuma, Haru Nagatomo, Masami Yokota Hirai, Yukihiro Sugimoto, Atsuhiko Kushida, Keiji Tanino and 1 more

Abstract read
In one paragraph

Article in The New phytologist, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Ryota AkiyamaGraduate School of Agricultural Science, Kobe University, Rokkodai 1-1, Nada, Kobe, Hyogo, 657-8501, Japan.ORCID 0000-0003-2116-4226
Yui KawanoGraduate School of Agricultural Science, Kobe University, Rokkodai 1-1, Nada, Kobe, Hyogo, 657-8501, Japan.
Kosuke ShimizuGraduate School of Agricultural Science, Kobe University, Rokkodai 1-1, Nada, Kobe, Hyogo, 657-8501, Japan.
Soichiro MakinoGraduate School of Agricultural Science, Kobe University, Rokkodai 1-1, Nada, Kobe, Hyogo, 657-8501, Japan.
Karen AkanumaGraduate School of Agricultural Science, Kobe University, Rokkodai 1-1, Nada, Kobe, Hyogo, 657-8501, Japan.
Haru NagatomoGraduate School of Agricultural Science, Kobe University, Rokkodai 1-1, Nada, Kobe, Hyogo, 657-8501, Japan.
Masami Yokota HiraiRIKEN Center for Sustainable Resource Science, Suehiro-cho 1-7-22, Tsurumi-ku, Yokohama, Kanagawa, 230-0045, Japan.ORCID 0000-0003-0802-6208
Yukihiro SugimotoGraduate School of Agricultural Science, Kobe University, Rokkodai 1-1, Nada, Kobe, Hyogo, 657-8501, Japan.ORCID 0000-0002-8767-9671
Atsuhiko KushidaTechnology Application Research Team, Department of Research Promotion, Hokkaido Agricultural Research Center, NARO, 1 Hitsujigaoka, Toyohira, Sapporo, Hokkaido, 062-8555, Japan.ORCID 0000-0002-4549-7861
Keiji TaninoDepartment of Chemistry, Faculty of Science, Hokkaido University, Sapporo, Hokkaido, 060-0810, Japan.
Masaharu MizutaniGraduate School of Agricultural Science, Kobe University, Rokkodai 1-1, Nada, Kobe, Hyogo, 657-8501, Japan.ORCID 0000-0002-4321-0644

Funding

Japan Advanced Plant Science NetworkJST ACT-X JPMJAX21B1 23K13885JST ACT-X JPMJAX21B1 24K01694
6 · The paper itself

Abstract

Eclepins are root-secreted compounds that induce the hatching of cyst nematodes. Solanoeclepin A (SEA) and B (SEB) have been isolated as potent hatching factors for potato cyst nematodes (PCNs). SEB is biosynthesized in roots, released into the rhizosphere, and converted into SEA by soil microorganisms. However, given that SEB and SEA exhibit comparable hatching-inducing activity toward PCNs, the ecological significance of microbial solanoeclepin metabolism in eclepin-mediated communication remains unclear. In this study, we identified solanoeclepin C (SEC), a previously unrecognized solanoeclepin secreted by tomato and potato roots. Structural analysis revealed that SEC is an acetylated derivative of SEB. Soil incubation experiments demonstrated that SEC is converted into SEB and subsequently into SEA. SEC exhibits  10 000-fold lower hatching-inducing activity than SEA. Gene expression analysis in hydroponically grown tomatoes showed that solanoeclepin biosynthesis is upregulated under nitrogen and phosphorus deficiencies, with nitrogen starvation having the strongest effect. Our results demonstrate that although SEC itself exhibits low hatching-inducing activity, it is converted by soil microorganisms into SEB and SEA, which are then exploited by PCNs to trigger their hatching. These findings reveal a previously unrecognized three-way interaction among plants, soil microbes, and nematodes mediated by solanoeclepins.

Indexed as

NematodaPlant RootsRhizosphereSolanum tuberosumTylenchoideaAnimalsNitrogenPhosphorusSolanum lycopersicumNitrogenPhosphoruspotatopotato cyst nematodesolanoeclepintomatotriteprenoid

Identifiers

PMID40415572
PMCPMC12222916

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.