Evidence map›Paper›PMID 40413234›Full record

ArticleScientific data2025

A chromosomal-level genome assembly of Araneus marmoreus Schenkel, 1953 (Araneae: Araneidae).

Lu-Yu Wang, Lin Xiao, Tian-Yu Ren, Ling-Xin Cheng, Jun-Han Xiong, Zheng Fan, Zhi-Sheng Zhang

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Lu-Yu Wang *Key Laboratory of Eco-environments in Three Gorges Reservoir Region (Ministry of Education), School of Life Sciences, Southwest University, Chongqing, 400715, China.
Lin Xiao *Key Laboratory of Eco-environments in Three Gorges Reservoir Region (Ministry of Education), School of Life Sciences, Southwest University, Chongqing, 400715, China.
Tian-Yu Ren *Key Laboratory of Eco-environments in Three Gorges Reservoir Region (Ministry of Education), School of Life Sciences, Southwest University, Chongqing, 400715, China.
Ling-Xin ChengKey Laboratory of Eco-environments in Three Gorges Reservoir Region (Ministry of Education), School of Life Sciences, Southwest University, Chongqing, 400715, China.
Jun-Han XiongKey Laboratory of Eco-environments in Three Gorges Reservoir Region (Ministry of Education), School of Life Sciences, Southwest University, Chongqing, 400715, China.
Zheng FanKey Laboratory of Eco-environments in Three Gorges Reservoir Region (Ministry of Education), School of Life Sciences, Southwest University, Chongqing, 400715, China. fanzheng1993@gmail.com.ORCID http://orcid.org/0000-0001-7786-5465
Zhi-Sheng ZhangKey Laboratory of Eco-environments in Three Gorges Reservoir Region (Ministry of Education), School of Life Sciences, Southwest University, Chongqing, 400715, China. zhangzs327@qq.com.ORCID http://orcid.org/0000-0002-9304-1789

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The marbled orb-weaver spider, Araneus marmoreus (Araneae: Araneidae), is distinguished by its unique inflated, pumpkin-like abdomen. Numerous genome studies have been conducted on Araneidae species, providing insights into their unique biological traits. However, studies on A. marmoreus remain limited, despite its ecological significance and intriguing morphology. The lack of a high-quality reference genome has further hindered in-depth exploration of its evolutionary biology and ecological dynamics. Here, we present a chromosome-level genome assembly for A. marmoreus, generated using a combination of Illumina, PacBio, and Hi-C sequencing technologies. The assembled genome is 2.39 Gb in size, comprising 13 chromosomes, with a scaffold N50 of 181.8 Mb and a contig N50 of 721.3 kb. The assembly achieved a BUSCO completeness score of 97.1% (n = 2,934), including 91.0% complete and single-copy BUSCOs and 6.1% complete and duplicated BUSCOs. Repetitive sequences accounted for 59.25% of the genome, and 23,381 protein-coding genes were annotated. This high-quality genome provides a valuable resource for advancing research into the evolutionary genomics and ecological dynamics of A. marmoreus.

Indexed as

ChromosomesGenomeSpidersAnimals

Identifiers

PMID40413234
PMCPMC12103598

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.