Evidence map›Paper›PMID 40412384›Full record

ArticleMed (New York, N.Y.)2025

Pre-treatment untargeted cerebrospinal fluid metabolomic profiling in tuberculous meningitis uncovers pathways associated with mortality.

Thanh Hoang Nhat Le, Kirsten C J van Abeelen, Edwin Ardiansyah, Julian Avila-Pacheco, Sofiati Dian, Gesa Carstens, Lara Schramke, Hoang Thanh Hai, Tran Binh Minh Nguyen, Thai Minh Triet and 23 more

Abstract read
In one paragraph

Article in Med (New York, N.Y.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

33 authors.

Thanh Hoang Nhat LeOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.
Kirsten C J van AbeelenDepartment of Internal Medicine and Radboud Community for Infectious Diseases, Radboud University Medical Center, Nijmegen, the Netherlands.
Edwin ArdiansyahDepartment of Internal Medicine and Radboud Community for Infectious Diseases, Radboud University Medical Center, Nijmegen, the Netherlands; Research Center for Care and Control of Infectious Diseases, Universitas Padjadjaran, Bandung, Indonesia.
Julian Avila-PachecoBroad Institute of MIT and Harvard, Cambridge, MA, USA.
Sofiati DianResearch Center for Care and Control of Infectious Diseases, Universitas Padjadjaran, Bandung, Indonesia.
Gesa CarstensDepartment of Internal Medicine and Radboud Community for Infectious Diseases, Radboud University Medical Center, Nijmegen, the Netherlands.
Lara SchramkeDepartment of Internal Medicine and Radboud Community for Infectious Diseases, Radboud University Medical Center, Nijmegen, the Netherlands.
Hoang Thanh HaiOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.
Tran Binh Minh NguyenOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.
Thai Minh TrietOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.
Amy DeikBroad Institute of MIT and Harvard, Cambridge, MA, USA.
Jesse KrejciBroad Institute of MIT and Harvard, Cambridge, MA, USA.
Jeff PruyneBroad Institute of MIT and Harvard, Cambridge, MA, USA.
Lucas DaileyBroad Institute of MIT and Harvard, Cambridge, MA, USA.
Bachti AlisjahbanaResearch Center for Care and Control of Infectious Diseases, Universitas Padjadjaran, Bandung, Indonesia.
Mihai G NeteaDepartment of Internal Medicine and Radboud Community for Infectious Diseases, Radboud University Medical Center, Nijmegen, the Netherlands.
Riwanti EstiasariOxford University Clinical Research Unit Indonesia, Faculty of Medicine, Universitas Indonesia, Jakarta, Indonesia.
Trinh Thi Bich TramOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.
Joseph DonovanOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.
Dorothee HeemskerkOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.
Thi Hong Chau TranOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam.
Nguyen Duc BangPham Ngoc Thach Hospital, Ho Chi Minh City, Vietnam.
Ahmad Rizal GaniemResearch Center for Care and Control of Infectious Diseases, Universitas Padjadjaran, Bandung, Indonesia.
Raph L HamersOxford University Clinical Research Unit Indonesia, Faculty of Medicine, Universitas Indonesia, Jakarta, Indonesia.
Rovina RuslamiResearch Center for Care and Control of Infectious Diseases, Universitas Padjadjaran, Bandung, Indonesia.
Darma ImranOxford University Clinical Research Unit Indonesia, Faculty of Medicine, Universitas Indonesia, Jakarta, Indonesia.
Kartika MaharaniOxford University Clinical Research Unit Indonesia, Faculty of Medicine, Universitas Indonesia, Jakarta, Indonesia.
Vinod KumarDepartment of Internal Medicine and Radboud Community for Infectious Diseases, Radboud University Medical Center, Nijmegen, the Netherlands.
Reinout van CrevelDepartment of Internal Medicine and Radboud Community for Infectious Diseases, Radboud University Medical Center, Nijmegen, the Netherlands; Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, UK.
Guy ThwaitesOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam; Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, UK.
Clary B ClishBroad Institute of MIT and Harvard, Cambridge, MA, USA.
Nguyen Thuy Thuong ThuongOxford University Clinical Research Unit, Ho Chi Minh City, Vietnam; Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, UK. Electronic address: thuongnttt@oucru.org.
Arjan van LaarhovenDepartment of Internal Medicine and Radboud Community for Infectious Diseases, Radboud University Medical Center, Nijmegen, the Netherlands; Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, UK. Electronic address: arjan.vanlaarhoven@radboudumc.nl.

Funding

National Institute of HealthWellcome Trust 110179Wellcome Trust 206724
6 · The paper itself

Abstract

backgroundDysregulation of cerebrospinal fluid (CSF) tryptophan metabolism contributes to the high mortality of tuberculous meningitis (TBM). We aimed to identify novel metabolic pathways associated with TBM mortality through untargeted metabolome-wide analysis.

methodsWe measured 619 metabolites using untargeted liquid chromatography-mass spectrometry in pre-treatment CSF from adults with TBM from Indonesia (n = 388, 34 HIV positive) and Vietnam (n = 679, 250 HIV positive). Sixty-day mortality was modeled using Cox regression, adjusting for age and HIV status. Metabolites were ranked in a screening subset (n = 194, Indonesia) and validated in the same cohort (n = 194) and externally (n = 679, Vietnam). Secondary analysis included variable selection, clustering to classify associated metabolites into subgroups, comparison with non-infectious controls, and correlation with patient characteristics, CSF cytokines, CSF protein, and serum metabolite concentrations.

findingsSixty-day mortality was 21.6% and was associated with the concentration of 10 CSF metabolites, including tryptophan. The strongest association was with 3-hydroxyoctanoate (FA 8:0;3OH), part of a cluster of hydroxylated fatty acids also including hydroxy-isocaproate (FA 6:0;OH), hydroxyisobutyrate (FA 4:0;OH), and C4-OH-carnitine. These fatty acids correlated weakly with CSF tumor necrosis factor alpha, interleukin-6 (IL-6), leukocyte counts, bacterial load, and CSF protein. Mediation analysis showed that the variation in fatty acids was linked directly to mortality rather than through disease severity.

conclusionWe identified and validated nine new metabolites associated with TBM mortality, independent of HIV status, disease severity, and tryptophan. These metabolites suggest that altered fatty acid β-oxidation is linked to TBM-associated mortality. Interventions targeting cerebral fatty acid metabolism may improve survival of TBM.

fundingNational Institute of Health; Wellcome Trust, UK.

Indexed as

MetabolomeTuberculosis, MeningealAdultBiomarkersChromatography, LiquidFemaleHIV InfectionsHumansIndonesiaMaleMetabolomicsMiddle AgedTryptophanVietnamBiomarkersTryptophancarnitinescerebrospinal fluidHIVhydroxylated fatty acidsmortalityprospective cohort studyresampling ranking approachTranslation to patientstryptophantuberculous meningitisuntargeted metabolomics

Identifiers

PMID40412384
PMCPMC7618751

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.