Evidence map›Paper›PMID 40410120›Full record

ArticleChemistry (Weinheim an der Bergstrasse, Germany)2025

Conformational Switch in the Alpha-Synuclein C-Terminal Domain Directs Its Fibril Polymorphs.

Cesar Aguirre, Yohei Miyanoiri, Masatomo So, Hajime Tamaki, Takahiro Maruno, Junko Doi, Nan Wang, Keiichi Yamaguchi, Kichitaro Nakajima, Yu Yamamori and 16 more

Abstract read
In one paragraph

Article in Chemistry (Weinheim an der Bergstrasse, Germany), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors.

Cesar AguirreDepartment of Neurology, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Yohei MiyanoiriLaboratory for Ultra-High Magnetic Field NMR Spectroscopy, Research Center for Next-Generation Protein Sciences, Institute for Protein Research, Osaka University, Japan, 3-2 Yamadaoka, Suita, Osaka, 565-0871, Japan.ORCID https://orcid.org/0000-0001-6889-5160
Masatomo SoGraduate School of Agriculture, Kyoto University, Kitashirakawa Oiwake-cho, Sakyo-ku, Kyoto, 606-8502, Japan.
Hajime TamakiLaboratory of Molecular Biophysics, Institute for Protein Research, Osaka University, Japan, 3-2 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Takahiro MarunoDepartment of Biotechnology, Graduate School of Engineering, Osaka University, Japan, 2-1 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Junko DoiDepartment of Neurology, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Nan WangDepartment of Neurology, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Keiichi YamaguchiGraduate School of Engineering, Osaka University, Japan, 2-1 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Kichitaro NakajimaGraduate School of Engineering, Osaka University, Japan, 2-1 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Yu YamamoriArtificial Intelligence Research Center (AIRC), National Institute of Advanced Industrial Science and Technology (AIST), 2-4-7 Aomi, Koto-ku, Tokyo, 135-0064, Japan.
Hiroko InouraArtificial Intelligence Research Center (AIRC), National Institute of Advanced Industrial Science and Technology (AIST), 2-4-7 Aomi, Koto-ku, Tokyo, 135-0064, Japan.
Chi-Jing ChoongDepartment of Neurology, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Keita KakudaDepartment of Neurology, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Takahiro AjikiDepartment of Neurology, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Yasuyoshi KimuraDepartment of Neurology, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, Osaka, 565-0871, Japan.ORCID https://orcid.org/0000-0001-9147-8058
Tatsuhiko OzonoDepartment of Neurology, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Kousuke BabaDepartment of Neurology, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Seiichi NaganoDepartment of Neurology, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Yoshitaka NagaiDepartment of Neurology, Faculty of Medicine, Kindai University, Osaka-Sayama, Osaka, Japan.
Hirotsugu OgiGraduate School of Engineering, Osaka University, Japan, 2-1 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Susumu UchiyamaDepartment of Biotechnology, Graduate School of Engineering, Osaka University, Japan, 2-1 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Yoh MatsukiLaboratory of Molecular Biophysics, Institute for Protein Research, Osaka University, Japan, 3-2 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Kentaro TomiiArtificial Intelligence Research Center (AIRC), National Institute of Advanced Industrial Science and Technology (AIST), 2-4-7 Aomi, Koto-ku, Tokyo, 135-0064, Japan.
Yuji GotoGraduate School of Engineering, Osaka University, Japan, 2-1 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Kensuke IkenakaDepartment of Neurology, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, Osaka, 565-0871, Japan.ORCID https://orcid.org/0000-0002-5559-1966
Hideki MochizukiDepartment of Neurology, Osaka University Graduate School of Medicine, 2-2 Yamadaoka, Suita, Osaka, 565-0871, Japan.

Funding

Japan Agency for Medical Research and Development JP22gm1410014Japan Agency for Medical Research and Development JP24ek0109771hJapan Agency for Medical Research and Development JP24gm1910008JSPS Core-to-Core Program A Advanced Research Networks JPJSCCA20180007JSPS KAKENHI JP22H02951JSPS KAKENHI JP22K07516JSPS KAKENHI JP22K15643JSPS KAKENHI JP23K18255JSPS KAKENHI JP23K24212JSPS KAKENHI JP24H00045JST FOREST Program JPMJFR231L
6 · The paper itself

Abstract

α-Synuclein (αSyn) inclusions are a pathological hallmark of several neurodegenerative disorders. While cryo-electron microscopy studies have revealed distinct fibril polymorphs across different synucleinopathies, the molecular switches controlling polymorphism remain unveiled. In this study, we found that fibril morphology is associated with the conformational state of monomeric αSyn. Through systematic evaluation of the ionic strength and temperature, we generated two distinct polymorphs: a twisted morphology at low ionic strength and temperature, and a rod-like morphology at higher ionic strength and temperature. Using solid-state NMR, we revealed that both polymorphs share a highly conserved core structure, with morphological differences arising probably from distinct structural arrangements at the protofilament interfaces. Furthermore, we found that a specific conformational change in the C-terminal domain of the monomeric αSyn serves as a molecular switch for the formation of polymorphs. Interestingly, this conformational change can also be triggered by calcium binding to the C-terminus, connecting environmental factors to specific fibril architectures. Our results reveal a conformational role for the C-terminal domain that influences αSyn fibril morphology, providing significant insights into the fibrogenesis of αSyn.

Indexed as

alpha-SynucleinAmyloidCalciumHumansOsmolar ConcentrationProtein ConformationProtein DomainsTemperaturealpha-SynucleinAmyloidCalciumalpha synucleinamyloid fibrilsfibril polymorphismNMRprotein foldingproteins

Identifiers

PMID40410120
PMCPMC12223483

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.