Evidence map›Paper›PMID 40408513›Full record

ArticlePLoS computational biology2025

M-band wavelet-based multi-view clustering of cells.

Tong Liu, Zihuan Liu, Wenke Sun, Adeethyia Shankar, Yongzhong Zhao, Xiaodi Wang

Abstract read
In one paragraph

Article in PLoS computational biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Tong LiuDepartment of Mathematical Sciences, Tsinghua University, Beijing, China.
Zihuan LiuData and Statistical Science, AbbVie, Chicago, Illinois, United States of America.
Wenke SunSchool of Economics and Management, Dalian University of Technology, Dalian, China.
Adeethyia ShankarBrown University, Providence, Rhode Island, United States of America.ORCID 0000-0003-4298-2797
Yongzhong ZhaoFrontage Labs, Exton, Pennsylvania, United States of America.
Xiaodi WangDepartment of Mathematics, Western Connecticut State University, Danbury, Connecticut, United States of America.ORCID 0000-0003-3150-9574

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Wavelet analysis has been recognized as a widely used and promising tool in the fields of signal processing and data analysis. However, the application of wavelet-based method in single-cell RNA sequencing (scRNA-seq) data is little known. Here, we present M-band wavelet-based scRNA-seq multi-view clustering of cells (WMC). We applied for integration of M-band wavelet analysis and uniform manifold approximation and projection (UMAP) to a panel of single cell sequencing datasets by breaking up the data matrix into an approximation or low resolution component and M-1 detail or high resolution components. Our method is armed with multi-view clustering of cell types, identity, and functional states, enabling missing cell types visualization and new cell types discovery. Distinct to standard scRNA-seq workflow, our wavelet-based approach is a new addition to uncover rare cell types with a fine resolution.

Indexed as

Sequence Analysis, RNASingle-Cell AnalysisWavelet AnalysisAlgorithmsAnimalsCluster AnalysisComputational BiologyHumansRNA-Seq

Identifiers

PMID40408513
PMCPMC12143518

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.