Evidence map›Paper›PMID 40408478›Full record

ArticleScience advances2025

Single-cell profiling demonstrates the combined effect of wheeze phenotype and infant viral infection on airway epithelial development.

Sergejs Berdnikovs, Dawn C Newcomb, Nana-Fatima Haruna, Kaitlin E McKernan, Shelby N Kuehnle, Tebeb Gebretsadik, Christopher McKennan, Siyuan Ma, Jacqueline-Yvonne Cephus, Christian Rosas-Salazar and 3 more

Abstract read
In one paragraph

Article in Science advances, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. TheBMJ open respiratory research · 2026
    Observational
  2. Unique nasal cell states induced by common pediatric respiratory viruses.bioRxiv : the preprint server for biology · 2026
    Article
  3. RelA Signaling inInternational journal of molecular sciences · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Sergejs BerdnikovsDivision of Allergy and Immunology, Department of Medicine, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.ORCID 0000-0001-5186-3293
Dawn C NewcombDepartment of Medicine, Vanderbilt University Medical Center, Nashville, TN, USA.ORCID 0000-0003-2592-9433
Nana-Fatima HarunaDivision of Allergy and Immunology, Department of Medicine, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.ORCID 0000-0002-4072-5554
Kaitlin E McKernanDepartment of Medicine, Vanderbilt University Medical Center, Nashville, TN, USA.ORCID 0000-0003-3171-7218
Shelby N KuehnleDepartment of Medicine, Vanderbilt University Medical Center, Nashville, TN, USA.ORCID 0009-0005-6919-0038
Tebeb GebretsadikDepartment of Biostatistics, Vanderbilt University Medical Center, Nashville, TN, USA.ORCID 0000-0003-4548-3010
Christopher McKennanDepartment of Statistics, University of Pittsburgh, Pittsburgh, PA, USA.ORCID 0000-0003-2096-8257
Siyuan MaDepartment of Biostatistics, Vanderbilt University Medical Center, Nashville, TN, USA.
Jacqueline-Yvonne CephusDepartment of Medicine, Vanderbilt University Medical Center, Nashville, TN, USA.ORCID 0000-0002-4691-4014
Christian Rosas-SalazarDepartment of Pediatrics, Vanderbilt University Medical Center, Nashville, TN, USA.ORCID 0000-0001-6644-5780
Larry J AndersonDepartment of Pediatrics, Emory University School of Medicine and Children's Healthcare of Atlanta, Atlanta, GA, USA.ORCID 0000-0002-0652-6834
James E GernDepartment of Pediatrics, University of Wisconsin School of Medicine and Public Health-Madison, Madison WI, USA.ORCID 0000-0002-6667-4708
Tina HartertDepartment of Medicine, Vanderbilt University Medical Center, Nashville, TN, USA.ORCID 0000-0001-7470-1166

Funding

Wisconsin Infant Study Cohort (WISC) ECHO Pediatric Follow-UpUH3OD023282 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI James E. Gern · 2018 to 2026
$64.8M
The Vanderbilt Institute for Clinical and Translational Research (VICTR)UL1TR000445 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI BERNARD, GORDON RAPHAEL · 2012 to 2016
$41.4M
Viral and Host Determinants of Infant and Childhood Allergy and AsthmaU19AI095227 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Sergejs Berdnikovs · 2011 to 2026
$34.9M
Wisconsin Infant Study Cohort (WISC) ECHO Pediatric Follow-UpUG3OD023282 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI GERN, JAMES E. · 2016 to 2024
$19.3M
Medical Scientist Training ProgramT32GM152284 · NIGMS · VANDERBILT UNIVERSITY · PI Christopher S. Williams · 2024 to 2026
$4.8M
Children's Allergy and Asthma Data Repository (CADRE) SupplementU24AI179612 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI James E. Gern · 2024 to 2026
$3.2M
Midcareer Investigator Patient-oriented Research Award in Bronchiolitis & AsthmaK24AI077930 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI HARTERT, TINA V · 2008 to 2017
$1.6M
NCATS NIH HHS UL1 TR000445NIAID NIH HHS K24 AI077930NIAID NIH HHS U19 AI095227NIAID NIH HHS U24 AI179612NIGMS NIH HHS T32 GM152284NIH HHS UG3 OD023282NIH HHS UH3 OD023282
6 · The paper itself

Abstract

The development of the airway epithelium in asthma is unclear. We characterized nasal airway epithelial cell (NAEC) developmental phenotypes from children aged 2 to 3 years in an a priori designed nested birth cohort from four mutually exclusive groups of wheezers/nonwheezers and respiratory syncytial virus (RSV)-infected/uninfected in the first year of life. NAECs were differentiated, followed by single-cell RNA sequencing analysis and in vitro RSV infection. Gene expression of NAECs from children with a wheeze phenotype indicated abnormal differentiation and basal cell activation of developmental pathways, plasticity in precursor differentiation, delayed onset of maturation, increased diversity of RSV receptors, and blunted antiviral immune responses to in vitro RSV infection. The most marked changes in differentiation were observed in NAECs from children with both wheeze and RSV in the first year of life. Together, this suggests that airway epithelium in children with wheeze is developmentally reprogrammed and characterized by increased barrier permeability, decreased antiviral response, and altered RSV receptor expression.

Indexed as

Epithelial CellsRespiratory MucosaRespiratory SoundsRespiratory Syncytial Virus InfectionsSingle-Cell AnalysisCell DifferentiationChild, PreschoolFemaleHumansInfantMalePhenotype

Identifiers

PMID40408478
PMCPMC12101503

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.