Evidence map›Paper›PMID 40407410›Full record

ArticleChembiochem : a European journal of chemical biology2025

Structural Basis of Regioselective Bromination of Tricyclic Tryptoline by the Tryptophan Halogenase Thal.

Simon Bork, Caroline Besse, Norbert Sewald, Hartmut H Niemann

Abstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Simon BorkDepartment of Chemistry, Structural Biochemistry, Bielefeld University, Universitätsstraße 25, 33615, Bielefeld, Germany.ORCID https://orcid.org/0000-0001-8520-9839
Caroline BesseDepartment of Chemistry, Organic and Bioorganic Chemistry, Bielefeld University, Universitätsstraße 25, 33615, Bielefeld, Germany.
Norbert SewaldDepartment of Chemistry, Organic and Bioorganic Chemistry, Bielefeld University, Universitätsstraße 25, 33615, Bielefeld, Germany.ORCID https://orcid.org/0000-0002-0309-2655
Hartmut H NiemannDepartment of Chemistry, Structural Biochemistry, Bielefeld University, Universitätsstraße 25, 33615, Bielefeld, Germany.ORCID https://orcid.org/0000-0002-8582-0360

Funding

Deutsche Forschungsgemeinschaft NI 694/10-1Deutsche Forschungsgemeinschaft SE 609/19-1Helmholtz-Zentrum Berlin für Materialien und Energie BESSY 2 MX: 17
6 · The paper itself

Abstract

Flavin-dependent halogenases (FDHs) carry out substrate-specific and regioselective halogenation reactions in the biosynthesis of various halogenated natural compounds. Several FDHs convert non-native substrates in vitro. However, obtaining experimental structures of FDHs with non-native substrates remains challenging, and docking often produces ambiguous results. Hence, there is a lack of data on how non-native substrates bind to FDHs. Here, we show that the tryptophan 6-halogenase Thal efficiently brominates the tricyclic indole derivative tryptoline (1,2,3,4-tetrahydro-β-carboline) with high regioselectivity. The two point mutations G113S and G469S improve regioselectivity even further. A crystal structure reveals how tryptoline binds to the active site of Thal. The halogenated carbons are located close to the catalytic lysine, and the NH of tryptoline's tetrahydropyridine is positioned like the amino group of the native substrate tryptophan. The substrate binding loop of Thal is closed, again resembling the binding of tryptophan. Our work extends the range of non-native substrates accepted by Thal, confirming the versatility of this FDH. Moreover, it is a rare example of an FDH structure in complex with a non-native substrate.

Indexed as

CarbolinesOxidoreductasesCatalytic DomainCrystallography, X-RayHalogenationModels, MolecularStereoisomerismSubstrate SpecificityCarbolinesOxidoreductasestryptolinetryptophan halogenaseenzymatic halogenationenzyme catalysisindole alkaloidsprotein structuresregioselectivity

Identifiers

PMID40407410
PMCPMC12247023

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.