Evidence map›Paper›PMID 40397930›Full record

ArticleJMIR medical informatics2025

Toward a Domain-Overarching Metadata Schema for Making Health Research Studies FAIR (Findable, Accessible, Interoperable, and Reusable): Development of the NFDI4Health Metadata Schema.

Haitham Abaza, Aliaksandra Shutsko, Sophie A I Klopfenstein, Carina N Vorisek, Carsten Oliver Schmidt, Claudia Brünings-Kuppe, Vera Clemens, Johannes Darms, Sabine Hanß, Timm Intemann and 20 more

Erratum issuedAbstract read
In one paragraph

Article in JMIR medical informatics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

30 authors.

Haitham AbazaScientific Databases and Visualization, Heidelberg Institute for Theoretical Studies (HITS), Heidelberg, Germany.ORCID 0000-0003-0155-1149
Aliaksandra ShutskoInformation Centre for Life Sciences, German National Library of Medicine (ZB MED), Cologne, Germany.ORCID 0000-0002-7091-5084
Sophie A I KlopfensteinCore Facility Digital Medicine and Interoperability, Universitätsmedizin Berlin, Berlin Institute of Health at Charité, Berlin, Germany.ORCID 0000-0002-8470-2258
Carina N VorisekCore Facility Digital Medicine and Interoperability, Universitätsmedizin Berlin, Berlin Institute of Health at Charité, Berlin, Germany.ORCID 0000-0001-7499-8115
Carsten Oliver SchmidtInstitute for Community Medicine, University Medicine Greifswald, Greifswald, Germany.ORCID 0000-0001-5266-9396
Claudia Brünings-KuppeDepartment of Biometry and Data Management, Leibniz Institute for Prevention Research and Epidemiology - BIPS, Bremen, Germany.ORCID 0009-0008-8835-6664
Vera ClemensInformation Centre for Life Sciences, German National Library of Medicine (ZB MED), Cologne, Germany.ORCID 0000-0002-9917-4443
Johannes DarmsInformation Centre for Life Sciences, German National Library of Medicine (ZB MED), Cologne, Germany.ORCID 0000-0001-5809-2276
Sabine HanßDepartment of Medical Informatics, University Medical Center Göttingen, Georg-August-University, Göttingen, Germany.ORCID 0000-0002-9133-8685
Timm IntemannDepartment of Biometry and Data Management, Leibniz Institute for Prevention Research and Epidemiology - BIPS, Bremen, Germany.ORCID 0000-0001-7836-3643
Franziska JannaschDepartment of Molecular Epidemiology, German Institute of Human Nutrition, Potsdam-Rehbruecke, Nuthetal, Germany.ORCID 0000-0003-3478-4758
Elisa KasbohmInstitute for Community Medicine, University Medicine Greifswald, Greifswald, Germany.ORCID 0000-0001-5261-538X
Birte LindstädtInformation Centre for Life Sciences, German National Library of Medicine (ZB MED), Cologne, Germany.ORCID 0000-0002-8251-1597
Matthias LöbeInstitute for Medical Informatics, Statistics and Epidemiology, University Leipzig, Leipzig, Germany.ORCID 0000-0002-2344-0426
Katharina NimptschMolecular Epidemiology Research Group, Max-Delbrück-Center for Molecular Medicine in the Helmholtz Association (MDC), Berlin, Germany.ORCID 0000-0001-7877-205X
Ute NöthlingsDepartment of Nutrition and Food Science, University of Bonn, Bonn, Germany.ORCID 0000-0002-5789-2252
Marisabel Gonzalez OcantoInformation Centre for Life Sciences, German National Library of Medicine (ZB MED), Cologne, Germany.ORCID 0000-0001-5485-9724
Tracy Bonsu OseiMolecular Epidemiology Research Group, Max-Delbrück-Center for Molecular Medicine in the Helmholtz Association (MDC), Berlin, Germany.ORCID 0000-0002-5228-4274
Ines PerrarDepartment of Nutrition and Food Science, University of Bonn, Bonn, Germany.ORCID 0000-0002-2830-6322
Manuela PetersDepartment of Biometry and Data Management, Leibniz Institute for Prevention Research and Epidemiology - BIPS, Bremen, Germany.ORCID 0000-0001-6012-1654
Tobias PischonMolecular Epidemiology Research Group, Max-Delbrück-Center for Molecular Medicine in the Helmholtz Association (MDC), Berlin, Germany.ORCID 0000-0003-1568-767X
Ulrich SaxDepartment of Medical Informatics, University Medical Center Göttingen, Georg-August-University, Göttingen, Germany.ORCID 0000-0002-8188-3495
Matthias B SchulzeDepartment of Molecular Epidemiology, German Institute of Human Nutrition, Potsdam-Rehbruecke, Nuthetal, Germany.ORCID 0000-0002-0830-5277
Florian SchwarzDepartment of Molecular Epidemiology, German Institute of Human Nutrition, Potsdam-Rehbruecke, Nuthetal, Germany.ORCID 0000-0002-1088-4773
Carolina SchwedhelmMolecular Epidemiology Research Group, Max-Delbrück-Center for Molecular Medicine in the Helmholtz Association (MDC), Berlin, Germany.ORCID 0000-0001-7617-6641
Sylvia ThunCore Facility Digital Medicine and Interoperability, Universitätsmedizin Berlin, Berlin Institute of Health at Charité, Berlin, Germany.ORCID 0000-0002-3346-6806
Dagmar WaltemathInstitute for Community Medicine, University Medicine Greifswald, Greifswald, Germany.ORCID 0000-0002-5886-5563
Atinkut A ZelekeInstitute for Community Medicine, University Medicine Greifswald, Greifswald, Germany.ORCID 0000-0001-7838-9050
Wolfgang MüllerScientific Databases and Visualization, Heidelberg Institute for Theoretical Studies (HITS), Heidelberg, Germany.ORCID 0000-0002-4980-3512
Martin GolebiewskiScientific Databases and Visualization, Heidelberg Institute for Theoretical Studies (HITS), Heidelberg, Germany.ORCID 0000-0002-8683-7084

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDespite wide acceptance in medical research, implementation of the FAIR (findability, accessibility, interoperability, and reusability) principles in certain health domains and interoperability across data sources remain a challenge. While clinical trial registries collect metadata about clinical studies, numerous epidemiological and public health studies remain unregistered or lack detailed information about relevant study documents. Making valuable data from these studies available to the research community could improve our understanding of various diseases and their risk factors. The National Research Data Infrastructure for Personal Health Data (NFDI4Health) seeks to optimize data sharing among the clinical, epidemiological, and public health research communities while preserving privacy and ethical regulations.

objectiveWe aimed to develop a tailored metadata schema (MDS) to support the standardized publication of health studies' metadata in NFDI4Health services and beyond. This study describes the development, structure, and implementation of this MDS designed to improve the FAIRness of metadata from clinical, epidemiological, and public health research while maintaining compatibility with metadata models of other resources to ease interoperability.

methodsBased on the models of DataCite, ClinicalTrials.gov, and other data models and international standards, the first MDS version was developed by the NFDI4Health Task Force COVID-19. It was later extended in a modular fashion, combining generic and NFDI4Health use case-specific metadata items relevant to domains of nutritional epidemiology, chronic diseases, and record linkage. Mappings to schemas of clinical trial registries and international and local initiatives were performed to enable interfacing with external resources. The MDS is represented in Microsoft Excel spreadsheets. A transformation into an improved and interactive machine-readable format was completed using the ART-DECOR (Advanced Requirement Tooling-Data Elements, Codes, OIDs, and Rules) tool to facilitate editing, maintenance, and versioning.

resultsThe MDS is implemented in NFDI4Health services (eg, the German Central Health Study Hub and the Local Data Hub) to structure and exchange study-related metadata. Its current version (3.3) comprises 220 metadata items in 5 modules. The core and design modules cover generic metadata, including bibliographic information, study design details, and data access information. Domain-specific metadata are included in use case-specific modules, currently comprising nutritional epidemiology, chronic diseases, and record linkage. All modules incorporate mandatory, optional, and conditional items. Mappings to the schemas of clinical trial registries and other resources enable integrating their study metadata in the NFDI4Health services. The current MDS version is available in both Excel and ART-DECOR formats.

conclusionsWith its implementation in the German Central Health Study Hub and the Local Data Hub, the MDS improves the FAIRness of data from clinical, epidemiological, and public health research. Due to its generic nature and interoperability through mappings to other schemas, it is transferable to services from adjacent domains, making it useful for a broader user community.

Indexed as

Biomedical ResearchInformation DisseminationMetadataHumansaccessibilitychronic diseasesclinical trialdata modelsdata sharingepidemiologicalepidemiologyFAIRfindabilityhealth researchimplementationinteroperability developmentmetadata standardsnutritionpublic healthreusabilitystructuretool

Identifiers

PMID40397930
PMCPMC12138291

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.