Evidence map›Paper›PMID 40394186›Full record

ArticleNature chemistry2025

A framework for evaluating the chemical knowledge and reasoning abilities of large language models against the expertise of chemists.

Adrian Mirza, Nawaf Alampara, Sreekanth Kunchapu, Martiño Ríos-García, Benedict Emoekabu, Aswanth Krishnan, Tanya Gupta, Mara Schilling-Wilhelmi, Macjonathan Okereke, Anagha Aneesh and 25 more

Abstract read
In one paragraph

Article in Nature chemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Review
  2. The automated red pen.Nature reviews. Chemistry · 2026
    Article
  3. Transforming Molecular Synthesis With Large Language Models.Chemistry (Weinheim an der Bergstrasse, Germany) · 2026
    Review
  4. Article
  5. Article
  6. Leveraging Large Language Models for Understanding Fundamental Principles of Catalysis.The journal of physical chemistry. C, Nanomaterials and interfaces · 2026
    Review
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. PredictingACS omega · 2026
    Article
  14. Article
  15. Assessing the Chemical Intelligence of Large Language Models.Journal of chemical information and modeling · 2026
    Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Assay2Mol: Large Language Model-based Drug Design Using BioAssay Context.Proceedings of the Conference on Empirical Methods in Natural Language Processing. Conference on Empirical Methods in Natural Language Processing · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

35 authors.

Adrian Mirza *Laboratory of Organic and Macromolecular Chemistry, Friedrich Schiller University Jena, Jena, Germany.ORCID 0000-0003-4033-4235
Nawaf Alampara *Laboratory of Organic and Macromolecular Chemistry, Friedrich Schiller University Jena, Jena, Germany.ORCID 0009-0001-7697-7315
Sreekanth Kunchapu *Laboratory of Organic and Macromolecular Chemistry, Friedrich Schiller University Jena, Jena, Germany.ORCID 0009-0003-5752-0154
Martiño Ríos-García *Laboratory of Organic and Macromolecular Chemistry, Friedrich Schiller University Jena, Jena, Germany.ORCID 0000-0003-1507-4048
Benedict EmoekabuLaboratory of Organic and Macromolecular Chemistry, Friedrich Schiller University Jena, Jena, Germany.ORCID 0009-0001-1860-8132
Aswanth KrishnanQpiVolta Technologies Pvt Ltd, Bengaluru, India.ORCID 0009-0008-2703-5613
Tanya GuptaLaboratory of Artificial Chemical Intelligence, Institut des Sciences et Ingénierie Chimiques, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.ORCID 0009-0001-9523-3290
Mara Schilling-WilhelmiLaboratory of Organic and Macromolecular Chemistry, Friedrich Schiller University Jena, Jena, Germany.ORCID 0009-0007-4392-5918
Macjonathan OkerekeLaboratory of Organic and Macromolecular Chemistry, Friedrich Schiller University Jena, Jena, Germany.ORCID 0009-0007-1013-0502
Anagha AneeshLaboratory of Organic and Macromolecular Chemistry, Friedrich Schiller University Jena, Jena, Germany.ORCID 0009-0001-0275-2586
Mehrdad AsgariDepartment of Chemical Engineering and Biotechnology, University of Cambridge, Cambridge, UK.ORCID 0000-0002-5427-1610
Juliane EberhardtMacromolecular Chemistry, University of Bayreuth, Bayreuth, Germany.ORCID 0009-0000-3991-0704
Amir Mohammad ElahiLaboratory of Molecular Simulation, Institut des Sciences et Ingénierie Chimiques, École Polytechnique Fédérale de Lausanne, Sion, Switzerland.ORCID 0009-0001-5907-101X
Hani M ElbeheiryInstitute for Inorganic and Analytical Chemistry, Friedrich Schiller University Jena, Jena, Germany.ORCID 0000-0002-5205-2852
María Victoria GilInstitute of Carbon Science and Technology, CSIC, Oviedo, Spain.ORCID 0000-0002-2258-3011
Christina Glaubitz
Maximilian GreinerLaboratory of Organic and Macromolecular Chemistry, Friedrich Schiller University Jena, Jena, Germany.
Caroline T HolickLaboratory of Organic and Macromolecular Chemistry, Friedrich Schiller University Jena, Jena, Germany.ORCID 0009-0000-1724-2725
Tim HoffmannLaboratory of Organic and Macromolecular Chemistry, Friedrich Schiller University Jena, Jena, Germany.ORCID 0009-0004-0230-6115
Abdelrahman IbrahimLaboratory of Organic and Macromolecular Chemistry, Friedrich Schiller University Jena, Jena, Germany.ORCID 0009-0003-1460-4710
Lea C KlepschLaboratory of Organic and Macromolecular Chemistry, Friedrich Schiller University Jena, Jena, Germany.ORCID 0009-0009-3849-1670
Yannik KösterLaboratory of Organic and Macromolecular Chemistry, Friedrich Schiller University Jena, Jena, Germany.ORCID 0000-0002-9125-3067
Fabian Alexander KrethInstitute for Technical Chemistry and Environmental Chemistry, Friedrich Schiller University Jena, Jena, Germany.ORCID 0000-0002-5968-8706
Jakob MeyerLaboratory of Organic and Macromolecular Chemistry, Friedrich Schiller University Jena, Jena, Germany.
Santiago MiretIntel Labs, Hillsboro, OR, USA.ORCID 0000-0002-5121-3853
Jan Matthias PeschelLaboratory of Organic and Macromolecular Chemistry, Friedrich Schiller University Jena, Jena, Germany.ORCID 0009-0002-4787-2757
Michael RinglebLaboratory of Organic and Macromolecular Chemistry, Friedrich Schiller University Jena, Jena, Germany.ORCID 0000-0002-7320-8529
Nicole C RoesnerLaboratory of Organic and Macromolecular Chemistry, Friedrich Schiller University Jena, Jena, Germany.ORCID 0000-0002-5133-775X
Johanna SchreiberLaboratory of Organic and Macromolecular Chemistry, Friedrich Schiller University Jena, Jena, Germany.ORCID 0009-0000-0991-8967
Ulrich S SchubertLaboratory of Organic and Macromolecular Chemistry, Friedrich Schiller University Jena, Jena, Germany.ORCID 0000-0003-4978-4670
Leanne M StafastLaboratory of Organic and Macromolecular Chemistry, Friedrich Schiller University Jena, Jena, Germany.ORCID 0009-0008-5604-261X
A D Dinga WonankeTheoretical Chemistry, Technische Universität Dresden, Dresden, Germany.ORCID 0000-0002-9066-2715
Michael PielerOpenBioML.org, London, UK.ORCID 0000-0001-9186-7045
Philippe SchwallerLaboratory of Artificial Chemical Intelligence, Institut des Sciences et Ingénierie Chimiques, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.ORCID 0000-0003-3046-6576
Kevin Maik JablonkaLaboratory of Organic and Macromolecular Chemistry, Friedrich Schiller University Jena, Jena, Germany. mail@kjablonka.com.ORCID 0000-0003-4894-4660

Funding

Deutsche Forschungsgemeinschaft (German Research Foundation) 497115849EC | Horizon 2020 Framework Programme (EU Framework Programme for Research and Innovation H2020) 101106377Ministry of Economy and Competitiveness | Agencia Estatal de Investigación (Spanish Agencia Estatal de Investigación) CNS2022-135474Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (Swiss National Science Foundation) 225147
6 · The paper itself

Abstract

Large language models (LLMs) have gained widespread interest owing to their ability to process human language and perform tasks on which they have not been explicitly trained. However, we possess only a limited systematic understanding of the chemical capabilities of LLMs, which would be required to improve models and mitigate potential harm. Here we introduce ChemBench, an automated framework for evaluating the chemical knowledge and reasoning abilities of state-of-the-art LLMs against the expertise of chemists. We curated more than 2,700 question-answer pairs, evaluated leading open- and closed-source LLMs and found that the best models, on average, outperformed the best human chemists in our study. However, the models struggle with some basic tasks and provide overconfident predictions. These findings reveal LLMs' impressive chemical capabilities while emphasizing the need for further research to improve their safety and usefulness. They also suggest adapting chemistry education and show the value of benchmarking frameworks for evaluating LLMs in specific domains.

Indexed as

ChemistryLanguageHumansLarge Language Models

Identifiers

PMID40394186
PMCPMC12226332

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