Evidence map›Paper›PMID 40394066›Full record

ArticleScientific data2025

Chromosome-scale whole genome assembly and annotation of the Jamaican field cricket Gryllus assimilis.

Yuki Ito, Ryuto Sanno, Seiya Ashikari, Kei Yura, Toru Asahi, Guillem Ylla, Kosuke Kataoka

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yuki Ito *Graduate School of Advanced Science and Engineering, Waseda University, Tokyo, Japan.
Ryuto Sanno *Graduate School of Advanced Science and Engineering, Waseda University, Tokyo, Japan.
Seiya AshikariEcologgie Inc., Tokyo, Japan.
Kei YuraGraduate School of Advanced Science and Engineering, Waseda University, Tokyo, Japan.ORCID http://orcid.org/0000-0003-0197-5478
Toru AsahiGraduate School of Advanced Science and Engineering, Waseda University, Tokyo, Japan.
Guillem YllaFaculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Kraków, Poland.ORCID http://orcid.org/0000-0003-4540-0131
Kosuke KataokaComprehensive Research Organization, Waseda University, Tokyo, Japan. kataokak@go.tuat.ac.jp.ORCID http://orcid.org/0000-0001-6023-7710

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gryllus assimilis, commonly known as Jamaican field cricket, is an edible insect with significant economic value in sustainable food production. Despite its importance, a high-quality reference genome of G. assimilis has not yet been published. Here, we report a chromosome-level reference genome of G. assimilis based on Oxford Nanopore Technologies (ONT) sequencing, Illumina sequencing, and Hi-C technologies. The assembled genome has a total length of 1.60 Gbp with a scaffold N50 of 102 Mbp, and 96.80% of the nucleotides was assigned to 15 chromosome-scale scaffolds. The assembly completeness was validated using BUSCO, achieving 99.5% completeness against the arthropoda database. We predicted 27,645 protein-coding genes, and 825 Mb repetitive elements were annotated in the reference genome. This reference genome of G. assimilis can provide a basis for the subsequent development of genomic resources, offering insights for future functional genomic studies, comparative genomics, and DNA-informed breeding of this species.

Indexed as

Chromosomes, InsectGenome, InsectGryllidaeAnimalsMolecular Sequence Annotation

Identifiers

PMID40394066
PMCPMC12092778

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.