Evidence map›Paper›PMID 40394056›Full record

ArticleScientific reports2025

Heuristic optimization in classification atoms in molecules using GCN via uniform simulated annealing.

Agnieszka Polowczyk, Alicja Polowczyk, Marcin Woźniak

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Agnieszka PolowczykFaculty of Applied Mathematics, Silesian University of Technology, Gliwice, 44-100, Poland.
Alicja PolowczykFaculty of Applied Mathematics, Silesian University of Technology, Gliwice, 44-100, Poland.
Marcin WoźniakFaculty of Applied Mathematics, Silesian University of Technology, Gliwice, 44-100, Poland. marcin.wozniak@polsl.pl.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Graph neural networks are becoming increasingly popular in deep learning due to their ability to process data in irregular structures and graphs thus preserving additional spatial dependencies due to the arrangement of nodes. This network allows for better accuracy results in classification problems, where information from neighbors is also crucial. However, training such a model is complex and time-consuming and challenging. To date, some metaheuristic algorithms have been used primarily to optimize convolutional networks and find suitable hyperparameters, these are: genetic algorithm, particle swarm optimization, differential evolution or covariance matrix adaptation evolution strategy. In this paper, we propose a metaheuristic algorithm of Simulated Annealing with Uniform distribution for optimization of weights in GCNs, as a hybrid in combination with gradient optimizers. The performance of our technique was tested on the QM7 Dataset, where it was split into two datasets: imbalanced and balanced. Experimental results confirm that our proposed optimization method outperformed other standalone SOTA optimization models, including gradient and heuristics methods, demonstrating in each case to lower loss function values, higher accuracy values for balanced dataset and higher AUC (macro) values for imbalanced dataset.

Indexed as

Graph convolutional networkMetaheuristic optimizationNode classificationSimulated annealingUniform distribution

Identifiers

PMID40394056
PMCPMC12092647

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.