Evidence map›Paper›PMID 40391897›Full record

ArticlemSystems2025

Genomic description of

Megan S Hill, Vanessa R Minnis, Anna C Simpson, Mariana C Salas Garcia, Davis Bone, Ryan K Chung, Ella Rushton, Asif Hameed, Punchappady D Rekha, Jack A Gilbert and 1 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in mSystems, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Megan S Hill *Department of Pediatrics, University of California San Diego School of Medicine, La Jolla, California, USA.ORCID 0000-0001-6732-477X
Vanessa R Minnis *Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California San Diego, La Jolla, California, USA.
Anna C SimpsonBiotechnology and Planetary Protection Group, Jet Propulsion Laboratory, California Institute of Technology, Pasadena, California, USA.
Mariana C Salas GarciaDepartment of Pediatrics, University of California San Diego School of Medicine, La Jolla, California, USA.
Davis BoneDepartment of Pediatrics, University of California San Diego School of Medicine, La Jolla, California, USA.
Ryan K ChungCenter for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California San Diego, La Jolla, California, USA.
Ella RushtonCenter for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California San Diego, La Jolla, California, USA.
Asif HameedDivision of Microbiology and Biotechnology, Yenepoya Research Center, Yenepoya (Deemto be University), Mangalore, India.ORCID 0000-0003-4445-7080
Punchappady D RekhaDivision of Microbiology and Biotechnology, Yenepoya Research Center, Yenepoya (Deemto be University), Mangalore, India.ORCID 0000-0002-9187-6395
Jack A GilbertDepartment of Pediatrics, University of California San Diego School of Medicine, La Jolla, California, USA.ORCID 0000-0001-7920-7001
Kasthuri VenkateswaranBiotechnology and Planetary Protection Group, Jet Propulsion Laboratory, California Institute of Technology, Pasadena, California, USA.ORCID 0000-0002-6742-0873

Funding

Illumina NovaSeq 6000 Sequencing SystemS10OD026929 · OD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JEPSEN, KRISTEN LYNN · 2019 to 2019
$600k
NIH HHS S10 OD026929
6 · The paper itself

Abstract

A novel bacterial strain, designated as 1F8SW-P5 IMPORTANCE: Crew members are at an increased risk for exposure to and infection by pathogenic microbes during spaceflight. Therefore, it is imperative to characterize the species that are able to colonize and persist on spacecraft, how those organisms change in abundance and distribution over time, and their genotypic potential for and phenotypic expression of pathogenic traits (i.e., whether they encode for or exhibit traits associated with antibiotic resistance and/or virulence). Here, we describe a novel species of

Indexed as

Genome, BacterialMicrobacteriumAnti-Bacterial AgentsDNA, BacterialDrug Resistance, BacterialMicrobial Sensitivity TestsPhenotypePhylogenyRNA, Ribosomal, 16SSpacecraftVirulenceAnti-Bacterial AgentsDNA, BacterialRNA, Ribosomal, 16SActinomycetotaantibiotic resistanceCaenorhabditis elegansInternational Space Station (ISS)Microbacteriumspace biologyvirulence

Identifiers

PMID40391897
PMCPMC12172488

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.