Evidence map›Paper›PMID 40391300›Full record

ArticleMolecular therapy. Nucleic acids2025

Fighting RNA viruses with a gold nanoparticle Cas13d gene-editing armor.

Alessandro De Carli, Domenico Favaro, Carolina Filipponi, Fabio Filippini, Rossella Fonnesu, Erika Plicanti, Silvia Nottoli, Piotr Barski, Agnieszka Lindstaedt, Dariusz Witt and 8 more

Abstract read
In one paragraph

Article in Molecular therapy. Nucleic acids, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Expanding the CRISPR/Cas toolkit: applications in proteomics and theranostics.Frontiers in bioengineering and biotechnology · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Alessandro De CarliDepartment of Medical Biotechnologies, University of Siena, 53100 Siena, Italy.
Domenico FavaroRetrovirus Center, Department of Translational Research and New Technologies in Medicine and Surgery, University of Pisa, 56127 Pisa, Italy.
Carolina FilipponiRetrovirus Center, Department of Translational Research and New Technologies in Medicine and Surgery, University of Pisa, 56127 Pisa, Italy.
Fabio FilippiniRetrovirus Center, Department of Translational Research and New Technologies in Medicine and Surgery, University of Pisa, 56127 Pisa, Italy.
Rossella FonnesuVirology Unit, Pisa University Hospital, 56124 Pisa, Italy.
Erika PlicantiDepartment of Medical Biotechnologies, University of Siena, 53100 Siena, Italy.
Silvia NottoliVirology Unit, Pisa University Hospital, 56124 Pisa, Italy.
Piotr BarskiProChimia Surfaces Sp. z o.o., Al Zwycięstwa 96/98 F8, 81-451 Gdynia, Poland.
Agnieszka LindstaedtProChimia Surfaces Sp. z o.o., Al Zwycięstwa 96/98 F8, 81-451 Gdynia, Poland.
Dariusz WittProChimia Surfaces Sp. z o.o., Al Zwycięstwa 96/98 F8, 81-451 Gdynia, Poland.
Alessandra FalleniDepartment of Clinical and Experimental Medicine, Section of Applied Biology and Genetics, and INSTM Local Unit, University of Pisa, 56126 Pisa, Italy.
Giada FrenzilliDepartment of Clinical and Experimental Medicine, Section of Applied Biology and Genetics, and INSTM Local Unit, University of Pisa, 56126 Pisa, Italy.
Ana Alcalá-LalindeAmsterdam UMC, University of Amsterdam, Medical Microbiology and Infection Prevention, Meibergdreef 9, Amsterdam 1105AZ, the Netherlands.
Elena Herrera-CarrilloAmsterdam UMC, University of Amsterdam, Medical Microbiology and Infection Prevention, Meibergdreef 9, Amsterdam 1105AZ, the Netherlands.
Vittoria RaffaDepartment of Biology, Università di Pisa, 56127 Pisa, Italy.
Giulia FreerRetrovirus Center, Department of Translational Research and New Technologies in Medicine and Surgery, University of Pisa, 56127 Pisa, Italy.
Mauro PistelloRetrovirus Center, Department of Translational Research and New Technologies in Medicine and Surgery, University of Pisa, 56127 Pisa, Italy.
Michele LaiRetrovirus Center, Department of Translational Research and New Technologies in Medicine and Surgery, University of Pisa, 56127 Pisa, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A novel Cas13d-based gene-editing approach has been developed to target viral RNAs in infected cells, reducing the replication of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and Zika virus (ZIKV) by up to 90% compared with controls. Despite its potential, the use of Cas13d as an antiviral faces several challenges that limit its effectiveness before reaching target cells. This study presents a proof-of-concept strategy for constructing Cas13d with gold nanoparticles (Au_NPs) to destroy SARS-CoV-2 and ZIKV genomes into cells. The Au_NPs Cas13d complexes were administered to Huh-7 cells infected with either virus, in single or multiple doses. The study demonstrated that Au_NPs Cas13d cuts target RNAs with comparable efficiency as lipofected ribonucleoprotein (RNP). Additionally, we found that Au_NPs Cas13d can spontaneously enter cells by endocytosis or diffusion, before the first 4 h of treatment. Au_NPs Cas13d co-localized with SARS-CoV-2 virions in early endosomes and reduced SARS-CoV-2 replication after a single administration, unlike RNPs, which showed no antiviral activity. However, Au_NPs Cas13d was less efficient at reducing ZIKV replication compared with lipofected Cas13d-RNPs, likely due to different intracellular localization. These results suggest that Au_NPs can be adapted as a new antiviral strategy, highlighting an innovative delivery method of Cas13d against viruses without the need for transfecting, providing a new gene-editing-based approach against emerging RNA viruses.

Indexed as

Au_NPs Cas13dCas13demerging virusesgold nanoparticlesMT: RNA/DNA EditingRNA virusesSARS-CoV-2Zika virus

Identifiers

PMID40391300
PMCPMC12088821

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.