Evidence map›Paper›PMID 40385395›Full record

ArticlemedRxiv : the preprint server for health sciences2025

Linking international registries to FHIR and Phenopackets with RareLink: a scalable REDCap-based framework for rare disease data interoperability.

Adam S L Graefe, Filip Rehburg, Samer Alkarkoukly, Daniel Danis, Ana Grönke, Miriam R Hübner, Alexander Bartschke, Thomas Debertshäuser, Sophie A I Klopfenstein, Julian Saß and 18 more

Abstract readPreprint
In one paragraph

Article in medRxiv : the preprint server for health sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

28 authors.

Adam S L GraefeBerlin Institute of Health at Charité Universitätsmedizin Berlin, Germany.ORCID 0009-0004-8124-8864
Filip RehburgBerlin Institute of Health at Charité Universitätsmedizin Berlin, Germany.ORCID 0009-0007-0457-5724
Samer AlkarkouklyMedical Data Integration Center (MeDIC), University of Cologne, Faculty of Medicine and University Hospital Cologne, Cologne, Germany.ORCID 0000-0003-1891-1366
Daniel DanisBerlin Institute of Health at Charité Universitätsmedizin Berlin, Germany.ORCID 0000-0003-0900-3411
Ana GrönkeMedical Data Integration Center (MeDIC), University of Cologne, Faculty of Medicine and University Hospital Cologne, Cologne, Germany.ORCID 0009-0006-9447-7687
Miriam R HübnerBerlin Institute of Health at Charité Universitätsmedizin Berlin, Germany.ORCID 0000-0001-5160-1242
Alexander BartschkeBerlin Institute of Health at Charité Universitätsmedizin Berlin, Germany.ORCID 0000-0002-5849-482X
Thomas DebertshäuserBerlin Institute of Health at Charité Universitätsmedizin Berlin, Germany.ORCID 0009-0005-9329-2675
Sophie A I KlopfensteinBerlin Institute of Health at Charité Universitätsmedizin Berlin, Germany.ORCID 0000-0002-8470-2258
Julian SaßBerlin Institute of Health at Charité Universitätsmedizin Berlin, Germany.ORCID 0000-0002-2068-7765
Julia FleckCenter for Rare Diseases, Medical Faculty, RWTH Aachen University, Aachen, Germany.ORCID 0000-0003-2766-4547
Mirko Rehberg5. Department of Pediatrics and Adolescent Medicine, Faculty of Medicine and University Hospital Cologne University of Cologne Cologne Germany.ORCID 0000-0001-9534-4102
Jana ZschüntzschDepartment of Neurology, University Medical Center Goettingen, Germany.ORCID 0000-0002-7062-5319
Elisabeth F NyounguiDepartment of Medical Informatics, University Medical Center Goettingen, Germany.ORCID 0000-0003-4263-4629
Tatiana KalashnikovaSection of Hematology and Immunology, Alberta Children's Hospital.ORCID 0009-0009-3825-144X
Luis Murguía-FavelaSection of Hematology and Immunology, Alberta Children's Hospital.ORCID 0000-0001-6893-3366
Beata DerfalviDepartment of Pediatrics, Division of Immunology, Dalhousie University, IWK Health, Halifax, NS, Canada.ORCID 0000-0001-7272-7119
Nicola A M WrightSection of Hematology and Immunology, Alberta Children's Hospital.ORCID 0000-0003-3144-4969
Shahida MoosaDivision of Molecular Biology and Human Genetics, Stellenbosch University, Cape Town, South Africa.ORCID 0000-0002-4463-3067
Soichi OgishimaINGEM, Tohoku University, Miyagi, Japan.ORCID 0000-0001-8613-2562
Oliver Semler5. Department of Pediatrics and Adolescent Medicine, Faculty of Medicine and University Hospital Cologne University of Cologne Cologne Germany.ORCID 0000-0003-0029-7556
Susanna WiegandDepartment of Pediatric Endocrinology and Diabetology, Charité University Hospital, Berlin, Germany.ORCID 0000-0001-8341-9533
Peter KühnenDepartment of Pediatric Endocrinology and Diabetology, Charité University Hospital, Berlin, Germany.ORCID 0000-0003-0211-176X
Christopher J MungallDivision of Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.ORCID 0000-0002-6601-2165
Melissa A HaendelDepartment of Genetics, University of North Carolina Chapel Hill, USA.ORCID 0000-0001-9114-8737
Peter N RobinsonBerlin Institute of Health at Charité Universitätsmedizin Berlin, Germany.ORCID 0000-0002-0736-9199
Sylvia ThunBerlin Institute of Health at Charité Universitätsmedizin Berlin, Germany.ORCID 0000-0002-3346-6806
Oya BeyanInstitute for Biomedical Informatics, University Hospital Cologne, Germany.ORCID 0000-0001-7611-3501

Funding

Improvements to the LinkML framework to support the Phenomics First open science resourceRM1HG010860 · NHGRI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI HAENDEL, MELISSA A, MUNGALL, CHRISTOPHER J · 2020 to 2024
$10.3M
The Human Phenotype Ontology: Accelerating Computational Integration of Clinical Data for GenomicsU24HG011449 · NHGRI · JACKSON LABORATORY · PI Peter Nicholas Robinson · 2021 to 2026
$6.7M
NHGRI NIH HHS RM1 HG010860NHGRI NIH HHS U24 HG011449
6 · The paper itself

Abstract

While Research Electronic Data Capture (REDCap) has been widely adopted in rare disease research, its unconstrained data format often leads to implementations that lack native interoperability with global health data standards, limiting secondary data use. To address this, we developed and validated

Identifiers

PMID40385395
PMCPMC12083603

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.