Evidence map›Paper›PMID 40383794›Full record

ArticleNature communications2025

A shared inflammatory signature across severe malaria syndromes manifested by transcriptomic, proteomic and metabolomic analyses.

Rafal S Sobota, Emily M Stucke, Drissa Coulibaly, Jonathan G Lawton, Bryan E Cummings, Savy Sebastian, Antoine Dara, James B Munro, Amed Ouattara, Abdoulaye K Kone and 23 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Metagenomic next-generation sequencing: new horizons in microbiology.Frontiers in cellular and infection microbiology · 2026
    Review
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

33 authors.

Rafal S SobotaMalaria Research Program, Center for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, MD, USA.ORCID http://orcid.org/0000-0002-5945-5830
Emily M StuckeMalaria Research Program, Center for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, MD, USA.
Drissa CoulibalyMalaria Research and Training Center, University of Sciences Techniques and Technologies, Bamako, Mali.
Jonathan G LawtonMalaria Research Program, Center for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, MD, USA.
Bryan E CummingsMalaria Research Program, Center for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, MD, USA.
Savy SebastianMalaria Research Program, Center for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, MD, USA.
Antoine DaraMalaria Research and Training Center, University of Sciences Techniques and Technologies, Bamako, Mali.
James B MunroInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA.
Amed OuattaraMalaria Research Program, Center for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, MD, USA.ORCID http://orcid.org/0000-0003-1964-7130
Abdoulaye K KoneMalaria Research and Training Center, University of Sciences Techniques and Technologies, Bamako, Mali.
Bourama KaneMalaria Research and Training Center, University of Sciences Techniques and Technologies, Bamako, Mali.
Karim TraoréMalaria Research and Training Center, University of Sciences Techniques and Technologies, Bamako, Mali.ORCID http://orcid.org/0000-0002-9553-6611
Bouréima GuindoMalaria Research and Training Center, University of Sciences Techniques and Technologies, Bamako, Mali.
Bourama M TangaraMalaria Research and Training Center, University of Sciences Techniques and Technologies, Bamako, Mali.
Amadou NiangalyMalaria Research and Training Center, University of Sciences Techniques and Technologies, Bamako, Mali.
Noah T VentimigliaMalaria Research Program, Center for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, MD, USA.
Modibo DaouMalaria Research and Training Center, University of Sciences Techniques and Technologies, Bamako, Mali.
Issa DiarraMalaria Research and Training Center, University of Sciences Techniques and Technologies, Bamako, Mali.
Youssouf ToloMalaria Research and Training Center, University of Sciences Techniques and Technologies, Bamako, Mali.
Mody SissokoMalaria Research and Training Center, University of Sciences Techniques and Technologies, Bamako, Mali.
Fayçal MaigaMalaria Research and Training Center, University of Sciences Techniques and Technologies, Bamako, Mali.
Aichatou DiawaraMalaria Research and Training Center, University of Sciences Techniques and Technologies, Bamako, Mali.
Amidou TraoreMalaria Research and Training Center, University of Sciences Techniques and Technologies, Bamako, Mali.
Ali TheraMalaria Research and Training Center, University of Sciences Techniques and Technologies, Bamako, Mali.
Matthew B LaurensMalaria Research Program, Center for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, MD, USA.ORCID http://orcid.org/0000-0003-3874-581X
Kirsten E LykeMalaria Research Program, Center for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, MD, USA.ORCID http://orcid.org/0000-0002-4966-0830
Bourema KouribaMalaria Research and Training Center, University of Sciences Techniques and Technologies, Bamako, Mali.
Ogobara K DoumboMalaria Research and Training Center, University of Sciences Techniques and Technologies, Bamako, Mali.
Christopher V PloweMalaria Research Program, Center for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, MD, USA.
David R GoodlettDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, BC, Canada.ORCID http://orcid.org/0000-0002-8045-8200
Joana C SilvaInstitute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA.ORCID http://orcid.org/0000-0001-6502-7026
Mahamadou A TheraMalaria Research and Training Center, University of Sciences Techniques and Technologies, Bamako, Mali.ORCID http://orcid.org/0000-0002-2679-035X
Mark A TravassosMalaria Research Program, Center for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, MD, USA. mtravass@som.umaryland.edu.ORCID http://orcid.org/0000-0002-6045-3322

Funding

FELLOWSHIP TRAINING PROGRAM IN VACCINOLOGYT32AI007524 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI Marcelo B. Sztein · 1997 to 2026
$6.4M
Safety, Immunogenicity and Efficacy of VaccineU19AI065683 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI PLOWE, CHRISTOPHER V. · 2005 to 2009
$4.7M
NRSA Training CoreTL1TR003100 · NCATS · JOHNS HOPKINS UNIVERSITY · PI SAHA, SOMNATH · 2019 to 2023
$4.5M
Variant surface antigens in cerebral malaria pathogenesisR01HL130750 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI FISHER, STEVEN A., PLOWE, CHRISTOPHER V. · 2015 to 2018
$2.1M
Malaria variant surface antigen expression and vulnerability to disease in Malian children with Hemoglobin C traitR01HL146377 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI TRAVASSOS, MARK A · 2019 to 2023
$1.9M
Research Education Program for Trainees in NeurologyR25NS070695 · NINDS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI KESSLER, JOHN A, SIMUNI, TANYA · 2010 to 2023
$1.4M
Host vulnerability and parasite genetics in the development of cerebral malariaR01AI099628 · NIAID · UNIV OF SCIENCES, TECH & TECH OF BAMAKO · PI THERA, MAHAMADOU ALI · 2014 to 2018
$625k
Burroughs Wellcome Fund (BWF) Burroughs Wellcome Fund/American Society of Tropical Medicine and Hygiene Postdoctoral FellowshipNCATS NIH HHS TL1 TR003100NHLBI NIH HHS R01 HL130750NHLBI NIH HHS R01 HL146377NIAID NIH HHS R01 AI099628NIAID NIH HHS T32 AI007524NIAID NIH HHS U19 AI065683NINDS NIH HHS R25 NS070695U.S. Department of Health & Human Services | NIH | National Heart, Lung, and Blood Institute (NHLBI) R01HL130750U.S. Department of Health & Human Services | NIH | National Heart, Lung, and Blood Institute (NHLBI) R01HL146377U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) R01AI099628U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) T32AI007524U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) U19AI065683U.S. Department of Health & Human Services | NIH | National Institute of Neurological Disorders and Stroke (NINDS) R25NS070695
6 · The paper itself

Abstract

Factors governing the clinical trajectory of Plasmodium falciparum infection remain an important area of investigation. Here we present transcriptomic, proteomic and metabolomic analyses comparing clinical subtypes of severe Plasmodium falciparum malaria to matched controls with uncomplicated disease in 79 children from Mali. MMP8, IL1R2, and ARG1 transcription is higher across cerebral malaria, severe malarial anemia, and concurrent cerebral malaria and severe malarial anemia, indicating a shared inflammatory signature. Tissue inhibitor of metalloproteinases 1 is the most upregulated protein in cerebral malaria, which along with elevated MMP8 and MMP9 transcription, underscores the importance of the metalloproteinase pathway in central nervous system pathophysiology. L-arginine metabolites are decreased in cerebral malaria, which coupled with increased ARG1 transcription suggests a putative mechanism impairing cerebral vasodilation. Using multi-omics approaches, we thus describe the inflammatory cascade in severe malaria syndromes, and identify potential therapeutic targets and biological markers.

Indexed as

InflammationMalaria, CerebralMalaria, FalciparumTranscriptomeArginineCase-Control StudiesChildChild, PreschoolFemaleGene Expression ProfilingHumansInfantMaleMaliMetabolomicsPlasmodium falciparumArginine

Identifiers

PMID40383794
PMCPMC12086225

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.