Evidence map›Paper›PMID 40382719›Full record

ArticleACS sensors2025

Extracting True Virus SERS Spectra and Augmenting Data for Improved Virus Classification and Quantification.

Yufang Liu, Yanjun Yang, Haoran Lu, Jiaheng Cui, Xianyan Chen, Ping Ma, Wenxuan Zhong, Yiping Zhao

Abstract read
In one paragraph

Article in ACS sensors, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yufang LiuDepartment of Statistics, Franklin College of Arts and Sciences, University of Georgia, Athens, Georgia 30602, United States.ORCID 0009-0004-9039-2681
Yanjun YangDepartment of Physics and Astronomy, Franklin College of Arts and Sciences, University of Georgia, Athens, Georgia 30602, United States.ORCID 0000-0002-1822-7364
Haoran LuDepartment of Statistics, Franklin College of Arts and Sciences, University of Georgia, Athens, Georgia 30602, United States.
Jiaheng CuiSchool of Electrical and Computer Engineering, College of Engineering, The University of Georgia, Athens, Georgia 30602, United States.ORCID 0009-0001-9936-3017
Xianyan ChenDepartment of Epidemiology & Biostatistics, College of Public Health, The University of Georgia, Athens, Georgia 30602, United States.
Ping MaDepartment of Statistics, Franklin College of Arts and Sciences, University of Georgia, Athens, Georgia 30602, United States.
Wenxuan ZhongDepartment of Statistics, Franklin College of Arts and Sciences, University of Georgia, Athens, Georgia 30602, United States.
Yiping ZhaoDepartment of Physics and Astronomy, Franklin College of Arts and Sciences, University of Georgia, Athens, Georgia 30602, United States.ORCID 0000-0002-3710-4159

Funding

Collaborative Research: DMS/NIGMS 2: Novel machine-learning framework for AFMscanner in DNA-protein interaction detectionR01GM152814 · NIGMS · UNIVERSITY OF GEORGIA · PI Wenxuan Zhong · 2023 to 2026
$1.2M
NIGMS NIH HHS R01 GM152814
6 · The paper itself

Abstract

Surface-enhanced Raman spectroscopy (SERS) is a transformative tool for infectious disease diagnostics, offering rapid and sensitive species identification. However, background spectra in biological samples complicate analyte peak detection, increase the limit of detection, and hinder data augmentation. To address these challenges, we developed a deep learning framework utilizing dual neural networks to extract true virus SERS spectra and estimate concentration coefficients in water for 12 different respiratory viruses. The extracted spectra showed a high similarity to those obtained at the highest viral concentration, validating their accuracy. Using these spectra and the derived concentration coefficients, we augmented spectral data sets across varying virus concentrations in water. XGBoost models trained on these augmented data sets achieved overall classification and concentration prediction accuracy of 92.3% with a coefficient of determination (

Indexed as

Spectrum Analysis, RamanVirusesDeep LearningHumansNeural Networks, ComputerSalivadata augmentationmachine learningsurface-enhanced Raman spectroscopytrue spectrum extractionvirus detection

Identifiers

PMID40382719
PMCPMC12210261

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.