Evidence map›Paper›PMID 40382145›Full record

ArticleMethods in enzymology2025

Collection, preparation, and biobanking of clinical specimens for analysis in polyaminopathies.

Elizabeth A VanSickle, Chad R Schultz, André S Bachmann, Caleb P Bupp

Abstract read
In one paragraph

Article in Methods in enzymology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Elizabeth A VanSickleDivision of Medical Genetics, Corewell Health/Helen DeVos Children's Hospital, Grand Rapids, MI, United States; International Center for Polyamine Disorders, Grand Rapids, MI, United States.
Chad R SchultzInternational Center for Polyamine Disorders, Grand Rapids, MI, United States; Department of Pediatrics and Human Development, College of Human Medicine, Michigan State University, Grand Rapids, MI, United States.
André S BachmannInternational Center for Polyamine Disorders, Grand Rapids, MI, United States; Department of Pediatrics and Human Development, College of Human Medicine, Michigan State University, Grand Rapids, MI, United States.
Caleb P BuppDivision of Medical Genetics, Corewell Health/Helen DeVos Children's Hospital, Grand Rapids, MI, United States; International Center for Polyamine Disorders, Grand Rapids, MI, United States; Department of Pediatrics and Human Development, College of Human Medicine, Michigan State University, Grand Rapids, MI, United States. Electronic address: caleb.bupp@corewellhealth.org.

Funding

Leveraging modulation of polyamine metabolism for therapeutic advantage in genetic disordersR01HD110500 · NICHD · MICHIGAN STATE UNIVERSITY · PI ANDRE S BACHMANN, Caleb Bupp · 2023 to 2026
$2.7M
NICHD NIH HHS R01 HD110500
6 · The paper itself

Abstract

Polyaminopathies are a relatively new family of rare genetic syndromes recently described in the literature. These syndromes are involved in the biosynthesis of polyamines, which include putrescine, spermidine, and spermine. Polyamines are aliphatic molecular that are found in most life forms, including humans, and are essential for embryogenesis, organogenesis, and tumorigenesis. The five known polyaminopathies that have been described to date include Snyder-Robinson Syndrome (SRS), Bachmann-Bupp Syndrome (BABS), Faundes-Banka Syndrome (FABAS), as well as neurodevelopmental disorders associated with variants in DHPS and DOHH. These syndromes share many overlapping clinical phenotypes, including developmental delay, hypotonia, and intellectual disability. Here we describe details for identifying and obtaining high-quality biological samples from patients with polyaminopathies. This includes special considerations for the informed consent process and the collection and shipment of biological samples for patients with rare diseases, many of whom live in countries around the world. We also detail the technical protocols for the collection, processing, storage, and tracking of biological samples for downstream research analysis specific to research in polyaminopathies, as well as biobanking for future use.

Indexed as

Biological Specimen BanksSpecimen HandlingHumansPolyaminesPolyaminesBachmann-Bupp SyndromeBiobankingBiospecimensDFMOMetabolomic analysisODC activity assayOrnithine decarboxylase (ODC)Pharmacokinetic analysisPolyamine analysisPolyaminopathies

Identifiers

PMID40382145
PMCPMC12702580

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.