Evidence map›Paper›PMID 40381931›Full record

ArticleAmerican journal of kidney diseases : the official journal of the National Kidney Foundation2025

Validation of an Algorithm to Identify End-Stage Kidney Disease in Electronic Health Records Data.

Chenxi Gao, Yunwen Xu, Sneha Mehta, Yingying Sang, Carina Flaherty, Aditya Surapaneni, Krutika Pandit, Alexander R Chang, Jamie A Green, Morgan E Grams and 1 more

Abstract readValidation Study
In one paragraph

Article in American journal of kidney diseases : the official journal of the National Kidney Foundation, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Chenxi GaoDepartment of Epidemiology, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland; Department of Surgery, New York University Grossman School of Medicine, New York, New York.
Yunwen XuDepartment of Epidemiology, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland.
Sneha MehtaDivision of Precision Medicine, Department of Medicine, New York University Grossman School of Medicine, New York University, New York, New York.
Yingying SangDepartment of Population Health, New York University Grossman School of Medicine, New York, New York.
Carina FlahertyDivision of Precision Medicine, Department of Medicine, New York University Grossman School of Medicine, New York University, New York, New York.
Aditya SurapaneniDivision of Precision Medicine, Department of Medicine, New York University Grossman School of Medicine, New York University, New York, New York.
Krutika PanditDivision of Precision Medicine, Department of Medicine, New York University Grossman School of Medicine, New York University, New York, New York.
Alexander R ChangDepartment of Nephrology, Geisinger, Danville, Pennsylvania; Department of Population Health Sciences, Geisinger, Danville, Pennsylvania.
Jamie A GreenDepartment of Nephrology, Geisinger, Danville, Pennsylvania; Department of Population Health Sciences, Geisinger, Danville, Pennsylvania.
Morgan E GramsDepartment of Epidemiology, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland; Division of Precision Medicine, Department of Medicine, New York University Grossman School of Medicine, New York University, New York, New York; Department of Population Health, New York University Grossman School of Medicine, New York, New York.
Jung-Im ShinDepartment of Epidemiology, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland. Electronic address: jshin19@jhmi.edu.

Funding

Medication Use and Adverse Events in CKDR01DK115534 · NIDDK · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Alexander R Chang, Morgan Erika Grams · 2018 to 2026
$5.7M
Challenges to Guideline-Recommended Diabetes Care in the United StatesR01DK139324 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI Jung-Im Shin · 2025 to 2026
$1.4M
NIDDK NIH HHS R01 DK115534NIDDK NIH HHS R01 DK139324
6 · The paper itself

Abstract

RATIONALE &

objectivesAccurate ascertainment of end-stage kidney disease (ESKD) in electronic health records (EHRs) data is important for much epidemiological research. This study developed and validated an algorithm using diagnosis and procedure codes to identify patients with ESKD (treated with maintenance dialysis or kidney transplantation) in EHR data. STUDY

designStudy of diagnostic algorithms. SETTING &

participantsThe development cohort included 559,615 patients treated at the Geisinger Health System (January 1996-June 2018). The validation cohort included 767,186 patients treated at New York University Langone Health System (January 2018 to December 2020). ALGORITHMS COMPARED: The algorithm used diagnosis and procedure codes compared with a nominal gold standard designation within the United States Renal Data System (USRDS) data. The performance of the algorithm was characterized by sensitivity, specificity, positive predictive value (PPV), and negative predictive value (NPV). The dates of incident ESKD between the algorithm and USRDS were compared in a subset of cases. OUTCOME: ESKD (maintenance dialysis, prior recipient of a kidney transplant, or kidney transplantation surgery) cases.

resultsIn Geisinger, we developed an ESKD algorithm that identified 4,766 (0.85%) ESKD cases; there were 5,155 (0.92%) ESKD cases reported by the USRDS. The sensitivity, specificity, PPV, and NPV of the algorithm were 73.9% (95% CI, 72.7-75.1%), 99.83% (99.82-99.84%), 79.9% (78.9-81.0%), and 99.76% (99.75-99.77%), respectively. When applying the algorithm to New York University Langone Health System data, the sensitivity, specificity, PPV, and NPV were 71.8% (95% CI, 70.7-73.0%), 99.95% (99.95-99.96%), 91.6% (90.8-92.4%), and 99.79 (99.78-99.80%), respectively. The median difference between dates of incident ESKD (algorithms minus USRDS) was-3 (IQR, -21 to 83) days for Geisinger and 0 (IQR, -12 to 69) days for New York University Langone Health. LIMITATIONS: Use of structured EHRs data only.

conclusionsAlgorithms combining diagnosis and procedure codes show high specificity and modest sensitivity for identifying patients with ESKD, providing a research tool to inform future EHRs-based studies. PLAIN-LANGUAGE SUMMARY: Although electronic health records (EHRs) data holds great promise for advancing kidney research, little work has been done to accurately identify ESKD cases in these data. This study developed and validated an algorithm using diagnosis and procedure codes to identify ESKD in EHRs. Our findings showed that the algorithm performed consistently in 2 different health systems, demonstrating high specificity and negative predictive values but lower sensitivity and positive predictive value. This algorithm may inform future ESKD research using EHR data.

Indexed as

AlgorithmsElectronic Health RecordsKidney Failure, ChronicAdultAgedCohort StudiesFemaleHumansKidney TransplantationMaleMiddle AgedRenal DialysisAlgorithmdialysisEHRselectronic health recordsend-stage kidney diseaseESKDkidney transplant

Identifiers

PMID40381931
PMCPMC12286722

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.