Evidence map›Paper›PMID 40381313›Full record

ArticleCortex; a journal devoted to the study of the nervous system and behavior2025

Using unsupervised dimensionality reduction to identify lesion patterns predictive of post-stroke aphasia severity.

Emerson Kropp, Maria Varkanitsa, Nicole Carvalho, Isaac Falconer, Anne Billot, Mohammad Al-Dabbagh, Swathi Kiran

Abstract read
In one paragraph

Article in Cortex; a journal devoted to the study of the nervous system and behavior, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

7 authors.

Emerson KroppCenter for Brain Recovery, Boston University, Boston, MA, United States. Electronic address: ekropp@bu.edu.
Maria VarkanitsaCenter for Brain Recovery, Boston University, Boston, MA, United States.
Nicole CarvalhoCenter for Brain Recovery, Boston University, Boston, MA, United States.
Isaac FalconerChobanian & Avedisian School of Medicine, Boston University, Boston, MA, United States.
Anne BillotDepartment of Neurology, Massachusetts General Hospital, Boston, MA, United States; Department of Psychology, Center for Brain Science, Harvard University, Cambridge, MA, United States.
Mohammad Al-DabbaghCenter for Brain Recovery, Boston University, Boston, MA, United States.
Swathi KiranCenter for Brain Recovery, Boston University, Boston, MA, United States.

Funding

Neurobiology of Language Recovery in Aphasia: Natural History and Treatment-Ind*P50DC012283 · NIDCD · NORTHWESTERN UNIVERSITY · PI THOMPSON, CYNTHIA K · 2013 to 2017
$11.7M
Functional reorganization of the language and domain-general multiple demand systems in aphasiaR01DC016950 · NIDCD · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI FEDORENKO, EVELINA, KIRAN, SWATHI · 2019 to 2023
$3.2M
NIDCD NIH HHS P50 DC012283NIDCD NIH HHS R01 DC016950
6 · The paper itself

Abstract

Although voxel-based methods consistently identify brain regions associated with specific language functions, these techniques are limited when applied to broader behavioral measures. To better represent effects of lesions on distributed brain regions, we used a data-driven approach called non-negative matrix factorization (NMF) to identify representative stroke patterns and explore associations with aphasia severity. Lesions were segmented using structural MRIs for 107 left hemisphere stroke patients, and the Western Aphasia Battery - Revised Aphasia Quotient (AQ) was used to quantify aphasia severity. Percent spared tissue was calculated in left hemisphere white and gray matter regions. By applying NMF to spared tissue data, we identified 5 NMF 'atoms' which represent prototypical stroke patterns across this dataset. Linear regression was used to identify whether certain stroke patterns were associated with aphasia severity, adjusted for lesion volume and demographics. Two NMF atoms showed relevance in predicting AQ: strokes with low spared tissue across the whole MCA territory were associated with more severe aphasia, but strokes with high spared tissue around the insula were associated with less severe aphasia. We also identified a pattern of high spared tissue in superior fronto-parietal regions, where lesion volume was more strongly associated with severity as a result of isolating damage to more critical language areas. These representative stroke patterns offer a new way to combine information about lesion burden and location and explore anatomical associations with language dysfunction in stroke.

Indexed as

AphasiaBrainStrokeAgedDimensionality ReductionFemaleGray MatterHumansMagnetic Resonance ImagingMaleMiddle AgedSeverity of Illness IndexAphasiaInsulaLanguageNon-negative matrix factorizationStroke

Identifiers

PMID40381313
PMCPMC12212971

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.